DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and styk1

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001123790.1 Gene:styk1 / 100170540 XenbaseID:XB-GENE-979179 Length:419 Species:Xenopus tropicalis


Alignment Length:425 Identity:110/425 - (25%)
Similarity:185/425 - (43%) Gaps:66/425 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 STAYLRVVRSLHVLEAGVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIE 347
            ||..|.:||:..           :....|.:|:.|..:.:....|::.|..||...:   .||.:
 Frog    18 STDQLCIVRTQE-----------YEVIVVPVFLIGVSVILLAIILWLRYRPRKPDED---DQRQD 68

  Fly   348 TVHQWTKKVIIFKPEGGG-DSSGSMDTMIM-PVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWE 410
            ...         ||..|. :.:.|::.:.: .|:|.:......|                    |
 Frog    69 EQR---------KPSAGYINHAISLEELTLDQVLRTKDPSLQAL--------------------E 104

  Fly   411 LPRSHLVLGATL-GEGAFGRVVMAEVN------NAIVAVKMVKEGHTDDDIASLVREMEVMKIIG 468
            :||..:.....| |||.||.:...::|      ...|.:|.::......:|...::.:.....:|
 Frog   105 IPRGRIRQPLQLAGEGRFGPIYRTKLNGPEDGKEKDVIIKRLRNSCGAQEIRDFLQRVAFQGWLG 169

  Fly   469 RHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRD-QDRDSSQPPPSPPAHVITEKD 532
            :|.||:.|||||....|..:::|....|:|..||:..|   || ...|..       .:.:||..
 Frog   170 QHPNIVELLGCCPNEKPFCMVLENIEPGSLLHFLWDCR---RDVMSMDGI-------LYDLTECQ 224

  Fly   533 LIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPI 597
            :...|.|:...:.:|..|:..|.||||||:|:..:...|:...|.|.:::.|..:......  |:
 Frog   225 VYTIALQVLSALGFLHQRKLFHGDLAARNILIHRNLTAKLTGLGGACEMRQTGTFPSRRPA--PL 287

  Fly   598 KWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMN 662
            ||||||.|......:||||||:||||:|::|.|..|||.| ...::..:|..|..|::|..|...
 Frog   288 KWMAPERLLRLPISAKSDVWSFGILLYEMITLGAPPYPEI-PPNDILQHLQRGNIMKRPPTCKPA 351

  Fly   663 IYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKED 697
            :|.:|:.||.:.|.:||...|:.:.::...:...|
 Frog   352 MYNVMKICWLWKAPERPSLPELRKRLESAKKASND 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845
IG_like 113..191 CDD:214653
IG_like 205..289 CDD:214653 3/5 (60%)
PKc_like 404..692 CDD:304357 88/295 (30%)
STYKc 416..688 CDD:214568 85/279 (30%)
styk1NP_001123790.1 PTKc 118..378 CDD:270623 84/272 (31%)
STYKc 118..377 CDD:214568 84/271 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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