Sequence 1: | NP_524394.2 | Gene: | htl / 42160 | FlyBaseID: | FBgn0010389 | Length: | 729 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096290.1 | Gene: | pdgfra / 100124862 | XenbaseID: | XB-GENE-6072920 | Length: | 1091 | Species: | Xenopus tropicalis |
Alignment Length: | 807 | Identity: | 213/807 - (26%) |
---|---|---|---|
Similarity: | 334/807 - (41%) | Gaps: | 214/807 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 103 WRNPKKMSFLQTRP-----SGSLLTLNCHALGNPEPNITWYRNGTVDWTRGYGSLKRN------- 155
Fly 156 ----RWTLTMEDLVPGDCGNYTCKVCNSLGCIRHDTQVIVSDRVN-HKPILMTGPLNLTLVVNST 215
Fly 216 GSMHCKYLSDLTSKKAWIF----VPCHGMTNCSNNRSIIAED----------------KDQLDFV 260
Fly 261 NVRMEQEGWYTCVESNSLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTS---------------F 310
Fly 311 VYIFVFGGLIFIFMTTLFVFYAIR----KMKHEKVLKQRIETVHQWTKKVI-------------- 357
Fly 358 --------IFKPEGGGDSSGSMDTMIMPVVRI-----------QKQR--------TTVLQNGNEP 395
Fly 396 APFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRVVMAEVNNAI-------VAVKMVKEGHTDDD 453
Fly 454 IASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRP----------- 507
Fly 508 -----FGRD--------------------------------------------------QDRDSS 517
Fly 518 --QPPPSPPAHVITEK-----------DLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYV 569
Fly 570 LKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPY 634
Fly 635 PTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLL--QTKED 697
Fly 698 YLDV--DIANLDTPPSTSDEEEDETDN 722 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
htl | NP_524394.2 | Ig | 112..191 | CDD:299845 | 25/94 (27%) |
IG_like | 113..191 | CDD:214653 | 25/93 (27%) | ||
IG_like | 205..289 | CDD:214653 | 19/103 (18%) | ||
PKc_like | 404..692 | CDD:304357 | 128/373 (34%) | ||
STYKc | 416..688 | CDD:214568 | 122/357 (34%) | ||
pdgfra | NP_001096290.1 | Ig_3 | 29..101 | CDD:404760 | |
Ig | 215..313 | CDD:416386 | 27/106 (25%) | ||
Ig strand A | 215..219 | CDD:409353 | 0/3 (0%) | ||
Ig strand A' | 226..230 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 232..241 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 246..251 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 254..256 | CDD:409353 | 1/4 (25%) | ||
Ig strand D | 260..268 | CDD:409353 | 4/9 (44%) | ||
Ig strand E | 272..280 | CDD:409353 | 2/7 (29%) | ||
Ig strand F | 290..296 | CDD:409353 | 2/5 (40%) | ||
Ig strand G | 301..307 | CDD:409353 | 3/5 (60%) | ||
Ig | 316..416 | CDD:416386 | 20/106 (19%) | ||
PTKc_PDGFR_alpha | 558..960 | CDD:173653 | 132/401 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |