DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and fgfr4

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_068071845.2 Gene:fgfr4 / 100000160 ZFINID:ZDB-GENE-980526-488 Length:923 Species:Danio rerio


Alignment Length:694 Identity:266/694 - (38%)
Similarity:378/694 - (54%) Gaps:85/694 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 GAADDDDNKADL----------PVNVSSKPYWRNPKKM-SFLQTRPSGSLLTLNCHALGNPEPNI 135
            |:.||||....|          .|.:|..|||.:.::| ..|...|:|:.:...|.|.|:|.|.|
Zfish   230 GSGDDDDEDNGLDDIGPETENDQVYISRAPYWTHTQRMEKKLYAVPAGNTVKFRCPATGSPLPTI 294

  Fly   136 TWYRNGTV---DWTRGYGSLKRNRWTLTMEDLVPGDCGNYTCKVCNSLGCIRHDTQVIVSDRVNH 197
            .|.:||..   :...|...|:...|:|.||.:||.|.|||:|.|.|..|.|.|...:.|.:|..|
Zfish   295 RWLKNGREFRGEHRIGGIKLRHQHWSLVMESVVPSDRGNYSCVVENKYGSIAHTYLLDVLERSPH 359

  Fly   198 KPILMTG-PLNLTLVVNSTGSMHCKYLSDLTSKKAWI-FVPCHG---------MTNCSNNRSIIA 251
            :|||..| |.|.|.:|.......||..||......|: .:..:|         ........|:..
Zfish   360 RPILQAGLPKNTTAIVGGDAQFLCKVYSDAQPHIQWLKHIEMNGSRYGPDGIPYVKIVKTGSLNM 424

  Fly   252 EDKDQLDFVNVRMEQEGWYTCVESNSLGQSNSTAYLRVV------RSLHVLEAGVASGSLHSTSF 310
            .:.:.|...|:.||..|.|||:..||:|.|:.:|:|.|:      :.:.::||......::::.|
Zfish   425 SEVEVLYLTNISMEDAGEYTCLAGNSIGFSHQSAWLTVLSEEDVAKEVDLMEAKYTDIIIYASGF 489

  Fly   311 VYIFVFGGLIFIFMTTLFV------FYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSG 369
            :.:.:  .::.:.:..:.|      |..:...|..|...:|..:|.              .:|||
Zfish   490 LALVM--AIVIVVLCRMQVHPSREPFDTLPVQKLSKFPLRRQYSVE--------------SNSSG 538

  Fly   370 SMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRVVMAE 434
            .....:|.|.|:....:.:|      |...|:|.|.|.:||.||.:|.||..||||.||:||.||
Zfish   539 KSSASLMRVARLSSSCSPML------AGVMEFELPYDPDWEFPRENLTLGKPLGEGCFGQVVRAE 597

  Fly   435 ---VNN------AIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIV 490
               :|.      |.|||||:|:..||.|:|.|:.|||:||::.:|.|||||||.|:|:|||||:|
Zfish   598 AYGINKENQDHMATVAVKMLKDDATDKDLADLISEMELMKVMDKHKNIINLLGVCTQDGPLYVLV 662

  Fly   491 EYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHR 555
            |||..|:|:::|...||.|.|...|.::.|...    :|.|||:..|:|:||||:||||:|||||
Zfish   663 EYASKGSLREYLRARRPPGMDYTFDVTKVPEEQ----LTFKDLVSCAYQVARGMEYLASKRCIHR 723

  Fly   556 DLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYG 620
            |||||||||::|.|:|||||||||.:...|||:|.||||||:||||||:|.::.|..:|||||:|
Zfish   724 DLAARNVLVTEDNVMKIADFGLARGVHQIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 788

  Fly   621 ILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIV 685
            :|:|||.|.|..|||.| ..|||:..|..|.||:||:.|:..:|:.||:|||.....||.|.::|
Zfish   789 VLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPSNCTHELYMKMRECWHAVPTQRPTFKQLV 852

  Fly   686 EYMDK-LLQTKEDYLDVDIANLDTP-----PSTSDEEED-ETDN 722
            |.:|: |:...::|||     |.||     ||..|.... .:||
Zfish   853 EELDRVLVSISDEYLD-----LSTPFEQYSPSCEDTSSSCSSDN 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 34/93 (37%)
Ig strand B 121..125 CDD:409353 0/3 (0%)
Ig strand C 134..138 CDD:409353 1/3 (33%)
Ig strand E 157..161 CDD:409353 2/3 (67%)
Ig strand F 171..176 CDD:409353 3/4 (75%)
Ig strand G 184..187 CDD:409353 1/2 (50%)
Ig 200..289 CDD:472250 28/99 (28%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 1/3 (33%)
Ig strand F 269..274 CDD:409353 3/4 (75%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 160/297 (54%)
fgfr4XP_068071845.2 None

Return to query results.
Submit another query.