DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7794 and TUB1

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_013625.1 Gene:TUB1 / 854889 SGDID:S000004550 Length:447 Species:Saccharomyces cerevisiae


Alignment Length:452 Identity:218/452 - (48%)
Similarity:308/452 - (68%) Gaps:14/452 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRL---TQSPM--DDSFLTFFEFTSHQPCVQPRL 65
            |:|.|::||||.||.||||||:.|||||..:|.|   ...|.  ::.|.|||..|.:...| ||.
Yeast     3 EVISINVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFV-PRA 66

  Fly    66 VMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADRCR 130
            :.:|.||.||||:|.|.|::||||:.||:||:|:.:|:|||:..:..|:|...::.||::||:|.
Yeast    67 IYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLADQCD 131

  Fly   131 NLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAHFS 195
            .|:|||...::|||:|||||:.::|.|..::||| :.:||.|||:|.:|..:|||||.:|..|.:
Yeast   132 GLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKK-SKLEFAVYPAPQVSTSVVEPYNTVLTTHTT 195

  Fly   196 MDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTNL 260
            ::.||.:|:|||||:||:|...|::|.|::.|||.:|||||||.|||.||.|...|...|.||||
Yeast   196 LEHADCTFMVDNEAIYDMCKRNLDIPRPSFANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNL 260

  Fly   261 VPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGDIA 325
            |||||||:||::|:|::..|.:...:.|.:::|..||:..||||:|:|..|||||:.||||||:.
Yeast   261 VPYPRIHFPLVSYSPVLSKSKAFHESNSVSEITNACFEPGNQMVKCDPRDGKYMATCLLYRGDVV 325

  Fly   326 PNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIAWC 390
            ..::..|:|.:|..::.:.|||.|||||||:...||...|...||..:||...:||.|:|..||.
Yeast   326 TRDVQRAVEQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEAWK 390

  Fly   391 RLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPEED 452
            |:..|||.:|.:||||:.|||||:|||.|.||.|::..|..||:||.|       ||..||:
Yeast   391 RIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDYIEVGA-------DSYAEEE 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 211/434 (49%)
PTZ00335 6..439 CDD:185562 213/437 (49%)
TUB1NP_013625.1 alpha_tubulin 2..436 CDD:276955 211/434 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S25
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.820

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