DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7794 and Tubd1

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001185974.1 Gene:Tubd1 / 56427 MGIID:1891826 Length:486 Species:Mus musculus


Alignment Length:502 Identity:115/502 - (22%)
Similarity:216/502 - (43%) Gaps:98/502 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IIQIHIGQAGVQIANACWE-LFCLEH---GILA--NGRLTQSPMDDSFLTFFEFTSHQPCVQPRL 65
            |:.:.:||.|.||....:: ||...|   |:.:  :....|:...:.|  |.|..:..|..  |.
Mouse     3 IVTVQLGQCGNQIGFEVFDALFRDSHCSQGLCSKRDNEAYQASCRERF--FREEENGVPVA--RA 63

  Fly    66 VMIDTEPTVIDE-----IRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRV 125
            |::|.||.||::     .::|.:.  :...|....|..||:|:|.||::...:..:..||.|:..
Mouse    64 VLVDMEPKVINQTLSKAAQSGRWN--YGQHTSFCQKQGSGNNWAYGYSVHGPKHEESIMNLIQTE 126

  Fly   126 ADRCRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALL 190
            .::|.:|.||.:..::.||:|||||..:.::|.:.:...:.:.: :::|. ....|||:.||::|
Mouse   127 VEKCDSLSGFFIIMSMAGGTGSGLGAFVTQKLQDQYSSSLKMNQ-IIWPY-GTGEVIVQNYNSIL 189

  Fly   191 AAHFSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSS-----FTASQRFG---- 246
            ........:|...|.:|:|::.|||..:|:...::.:||:::|..:.|     ::....|.    
Mouse   190 TLSHLYRSSDALLIHENDAVHKICAKRMNIKQISFRDLNQVLAHQLGSVFQPTYSEDSSFHYRRN 254

  Fly   247 ----------------------GGSTVSFQ----ELQTNLVPYPR----------------IHYP 269
                                  ..:.:||.    :|..:|||:|.                :.|.
Mouse   255 PLDSGTVGPQACLMPRIFVWSLSATNLSFYPQTGDLMEHLVPHPEFKMLGVRNIPQMSAASLAYS 319

  Fly   270 LINYAPLVPISHSQFVNMSTAQL-TGQCFQMSNQMVRCNPSHGKYMASVLLYRGDIAPNEINTAL 333
            ...:|.|  :.|.:.:.:|:|:: .|..:|:...:... |..||..|.        ..:..||:|
Mouse   320 AFTWAGL--LKHLRQMLISSAKMEEGINWQVRPPLTGL-PPIGKASAH--------KEHHFNTSL 373

  Fly   334 EN--IKRNRSFRFVDWSPTGFK---IGVSPMPPYYVPGGDLAPTNRA-------CVAISNNTNIR 386
            .|  :.|.|.....|  ..|||   :..|.:.|  |....:..|.||       ...:||:..:.
Mouse   374 ANLVVLRGREVHSAD--VEGFKDPALYTSWLEP--VDAFSVWKTQRAFDKYEKSAALVSNSQLLV 434

  Fly   387 IAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDY 433
            .....:|.|...::..:||::.|...|:||.:|.::...:.|:|..|
Mouse   435 KPLDMIVGKAWNMFSSKAFIHQYTKFGMEEEDFLDSFALLEQVVASY 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 115/502 (23%)
PTZ00335 6..439 CDD:185562 115/502 (23%)
Tubd1NP_001185974.1 delta_zeta_tubulin-like 2..483 CDD:276958 115/502 (23%)
Tubulin 2..213 CDD:278518 57/217 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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