DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7794 and tuba4b

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_012825888.1 Gene:tuba4b / 549448 XenbaseID:XB-GENE-489927 Length:452 Species:Xenopus tropicalis


Alignment Length:451 Identity:236/451 - (52%)
Similarity:317/451 - (70%) Gaps:9/451 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRL----TQSPMDDSFLTFFEFTSHQPCVQPRLV 66
            |.|.:|:||||||:.||||||:||||||..:|::    |....||||.|||..|.....| ||.|
 Frog     6 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFSETGAGKHV-PRAV 69

  Fly    67 MIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADRCRN 131
            .:|.|||||||:|.|:||.||||:.|||||:|:.:|:|||:..:..|::|..::.||::||:|..
 Frog    70 FVDLEPTVIDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLADQCTG 134

  Fly   132 LRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAHFSM 196
            |:|||||.:.|||:|||..:.:||||..|:||| :.:||.:||:|.:|..:|||||::|..|.::
 Frog   135 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK-SKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 198

  Fly   197 DCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTNLV 261
            :.:|.:|:|||||:||||...|::..||||||||:|:|:|||.|||.||.|...|...|.|||||
 Frog   199 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLV 263

  Fly   262 PYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGDIAP 326
            ||||||:||..|||::....:....:|.:::|..||:.:||||:|:|.||||||..||||||:.|
 Frog   264 PYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVP 328

  Fly   327 NEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIAWCR 391
            .::|.|:..||..|:.:||||.|||||:|::..||..|||||||...||...:||.|.|..||.|
 Frog   329 KDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWAR 393

  Fly   392 LVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPEED 452
            |.:|||.:|.:||||:.|||||:|||.|:||.|::..|..||.||...   |..|.|..|:
 Frog   394 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGID---SYEDEDEGEE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 230/433 (53%)
PTZ00335 6..439 CDD:185562 232/436 (53%)
tuba4bXP_012825888.1 PTZ00335 5..442 CDD:185562 232/440 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D514396at2759
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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