DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7794 and tubb3

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_989408.1 Gene:tubb3 / 395045 XenbaseID:XB-GENE-5886292 Length:449 Species:Xenopus tropicalis


Alignment Length:457 Identity:158/457 - (34%)
Similarity:261/457 - (57%) Gaps:24/457 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSFLT-------FFEFTSHQPCVQP 63
            ||:.|..||.|.||....||:...||||...|..    :.||.|.       :.|.:||:  ..|
 Frog     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPCGNY----IGDSDLQLERISVYYNEASSHK--YVP 61

  Fly    64 RLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADR 128
            |.:::|.||..:|.:|:|::.:||.||..|.|:..:|:|:|:|:....:||:|..::.:|:..:.
 Frog    62 RAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECEN 126

  Fly   129 CRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAH 193
            |..|:||.:..::|||:|||:||.::.::.|::..:: :..|.|.|||.:|..:||||||.|:.|
 Frog   127 CDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRI-MNTFSVVPSPKVSDTVVEPYNATLSIH 190

  Fly   194 FSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQT 258
            ..::..|.::.:|||||||||..||.:..|||.:||.:::..:|..|.|.||.|......::|..
 Frog   191 QLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAV 255

  Fly   259 NLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGD 323
            |:||:||:|:.:..:|||......|:..::..:||.|.|...|.|..|:|.||:|:....::||.
 Frog   256 NMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 320

  Fly   324 IAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIA 388
            ::..|::..:..|:...|..||:|.|...|:.|..:||   .|..::.|     .|.|:|.|:..
 Frog   321 MSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPP---RGLKMSST-----FIGNSTAIQEL 377

  Fly   389 WCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEV-DASA-PTSRRDSDPEE 451
            :.|:..:|..:::|:||::.|.|||::|..|.||..|:..||.:|.:. ||:| .......|.||
 Frog   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEE 442

  Fly   452 DS 453
            :|
 Frog   443 ES 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 151/436 (35%)
PTZ00335 6..439 CDD:185562 152/440 (35%)
tubb3NP_989408.1 PLN00220 1..447 CDD:215107 158/457 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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