DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7794 and tubb4a

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001032345.1 Gene:tubb4a / 394927 XenbaseID:XB-GENE-947407 Length:444 Species:Xenopus tropicalis


Alignment Length:454 Identity:154/454 - (33%)
Similarity:258/454 - (56%) Gaps:21/454 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSFL------TFFEFTSHQPCVQPR 64
            ||:.:..||.|.||....||:...||||...|    :...||.|      .::...|....| ||
 Frog     3 EIVHLQAGQCGNQIGAKFWEVISDEHGIDPTG----TYHGDSDLQLERINVYYNEASGGKYV-PR 62

  Fly    65 LVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADRC 129
            .|::|.||..:|.:|:|.:..:|.||..:.|:..:|:|:|:|:....:||:|..|:.:|:.::.|
 Frog    63 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVMDVVRKESESC 127

  Fly   130 RNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAHF 194
            ..|:||.:..::|||:|||:||.::.::.|::..:: :..|.|.|||.:|..:||||||.|:.|.
 Frog   128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTFSVVPSPKVSDTVVEPYNATLSVHQ 191

  Fly   195 SMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTN 259
            .::..|.::.:|||||||||..||.:..|||.:||.:::..:|..|...||.|......::|..|
 Frog   192 LVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVN 256

  Fly   260 LVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGDI 324
            :||:||:|:.:..:|||......|:.:::..:||.|.|...|.|..|:|.||:|:....::||.:
 Frog   257 MVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGRM 321

  Fly   325 APNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIAW 389
            :..|::..:.|::...|..||:|.|...|..|..:||   .|..:|.|     .|.|:|.|:..:
 Frog   322 SMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMAAT-----FIGNSTAIQELF 378

  Fly   390 CRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEV-DASAPTSRRDSDPEED 452
            .|:..:|..:::|:||::.|.|||::|..|.||..|:..||.:|.:. ||:|.....:.:.||:
 Frog   379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEE 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 149/435 (34%)
PTZ00335 6..439 CDD:185562 150/439 (34%)
tubb4aNP_001032345.1 PLN00220 1..427 CDD:215107 149/437 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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