DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7794 and tubb2b

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_989275.1 Gene:tubb2b / 394889 XenbaseID:XB-GENE-491121 Length:445 Species:Xenopus tropicalis


Alignment Length:453 Identity:151/453 - (33%)
Similarity:255/453 - (56%) Gaps:22/453 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSFLT-------FFEFTSHQPCVQP 63
            ||:.|..||.|.||....||:...||||...|    |...||.|.       :.|.|.::  ..|
 Frog     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG----SYHGDSDLQLERINVYYNEATGNK--FVP 61

  Fly    64 RLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADR 128
            |.:::|.||..:|.:|:|.:..:|.||..:.|:..:|:|:|:|:....:||:|..::.:|:.|:.
 Frog    62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 126

  Fly   129 CRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAH 193
            |..|:||.:..::|||:|||:||.::.::.|::..:: :..|.|.|||.:|..:||||||.|:.|
 Frog   127 CDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTFSVMPSPKVSDTVVEPYNATLSVH 190

  Fly   194 FSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQT 258
            ..::..|.::.:|||||||||..||.:..|||.:||.:::..:|..|...||.|......::|..
 Frog   191 QLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255

  Fly   259 NLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGD 323
            |:||:||:|:.:..:|||......|:..::..:||.|.|...|.|..|:|.||:|:....::||.
 Frog   256 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGR 320

  Fly   324 IAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIA 388
            ::..|::..:.|::...|..||:|.|...|..|..:||   .|..::.|     .|.|:|.|:..
 Frog   321 MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSAT-----FIGNSTAIQEL 377

  Fly   389 WCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPEE 451
            :.|:..:|..:::|:||::.|.|||::|..|.||..|:..||.:|.:...:....:.:.:.||
 Frog   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 149/436 (34%)
PTZ00335 6..439 CDD:185562 149/439 (34%)
tubb2bNP_989275.1 PLN00220 1..430 CDD:215107 149/441 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.