DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7794 and tube1

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_957279.2 Gene:tube1 / 393960 ZFINID:ZDB-GENE-040426-1174 Length:470 Species:Danio rerio


Alignment Length:479 Identity:135/479 - (28%)
Similarity:237/479 - (49%) Gaps:64/479 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPM-DDSFLTFFEFTSHQ------------P 59
            :.:.:||.|.|:....|:|...||     ..:.|..: ||:..:||.....:            .
Zfish     5 VVVQVGQCGNQVGCRFWDLALREH-----AHVNQMGVYDDALSSFFRNVDQRRGYGAEATGGKIT 64

  Fly    60 CVQPRLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRR 124
            .::.|.|::|.|..|:..|..|..|:||....||:....||:|:|.|::.......::.::.:|:
Zfish    65 GLKARAVLVDMEEGVLGGILQGPLRSLFSSAQLISDVSGSGNNWAVGHHTYGLAYREQIVDQVRK 129

  Fly   125 VADRCRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNAL 189
            .|:.|..|:.|.:..::|||:||||||.:::.|.|:|.:...:|. .|||:.. ..||..|||::
Zfish   130 AAEHCDCLQCFFLIHSMGGGTGSGLGTFVLKLLEEEFPEVYRIVT-SVYPTAE-DDVITSPYNSV 192

  Fly   190 LAAHFSMDCADVSFIVDNEALYDI--------------CA------------NTLNVPAPTYTNL 228
            ||.....:.||....|||::|.||              ||            ..:.|..| :..:
Zfish   193 LAMKELTEHADCVLPVDNQSLVDIVGKIKHMSNTGKPGCAIKKDSTIISGQGGVVKVEKP-FDAM 256

  Fly   229 NRIIAQVVSSFTASQRFGGGSTVSFQELQTNLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLT 293
            |.|:|.::.:.|:|.||.|...:...|:..||||:||:||.:.:..||..::..........|:.
Zfish   257 NNIVANLLLNITSSARFEGSLNMDLNEIAMNLVPFPRLHYLVSSLTPLYTLADVSVPPRRLDQMF 321

  Fly   294 GQCFQMSNQMVRCNPSHGKYMASVLLYRGDIAPNEINTALENIKRNR-SFRFVDWSPTGFKIGVS 357
            ...|...:|::|.:|.|..|:|..|:.||::   :::....||:|.| :..||.|:..|:|..:.
Zfish   322 SDAFSKEHQLIRADPKHNLYLACALMLRGNV---QLSDLRRNIERLRPTLPFVPWNQEGWKTSLC 383

  Fly   358 PMPPYYVPGGDLAPTNRACVAISNNTNIRIAWCRLVNKFDKLYQRRAFVYHYVG-EGLEEGNFNE 421
            .:    :|.|.    :.:.:|::|||.::..:..|..:|.|||:|:|.::||:. :|:|:..|.|
Zfish   384 SV----LPVGH----SHSLLALANNTCVKSTFSELRERFMKLYRRKAHLHHYLAVDGMEQSGFTE 440

  Fly   422 ASENICQLVHDYLEVDA----SAP 441
            |..:|..|:.||..::.    :||
Zfish   441 ALSSISTLIEDYTHLECPLMPNAP 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 133/468 (28%)
PTZ00335 6..439 CDD:185562 133/475 (28%)
tube1NP_957279.2 PTZ00387 1..467 CDD:240395 135/479 (28%)
epsilon_tubulin 2..455 CDD:276959 133/468 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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