DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7794 and alphaTub67C

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:461 Identity:225/461 - (48%)
Similarity:303/461 - (65%) Gaps:17/461 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANG------RLTQSPMDDSF---------LTFFEFT 55
            |::.|.|||.|:||.||||||:.|||||..:|      .||.|....|.         .|||..|
  Fly     3 EVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTET 67

  Fly    56 SHQPCVQPRLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMN 120
            .:...| ||.:.:|.||||||::|.|..|.|:||:.||:||:|:.:|:|||...:..|::||..:
  Fly    68 GNGKQV-PRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTS 131

  Fly   121 AIRRVADRCRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEP 185
            .::::|::|.:|:|||:|.::|||:|||..:.::|||..|:.||.. ::|.|||||.:|..:|||
  Fly   132 RLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCK-LDFAVYPSPKVSTAVVEP 195

  Fly   186 YNALLAAHFSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGST 250
            |||||..|.:||.:|..|:|||||:||||.|:|.|..|.|.||||:|||:|||.|||.||.|...
  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260

  Fly   251 VSFQELQTNLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMA 315
            |...|.||||||:||||:||:.||||:....|.....:...||..||:.||.||:|:|..||:||
  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325

  Fly   316 SVLLYRGDIAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAIS 380
            ..:|||||:.|.::|.|:..||..|..:||||.|||||||::...|.:||.||||.|:|||..:|
  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390

  Fly   381 NNTNIRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRR 445
            |.|.|.:|:..|..|||.::::||||:.|||||:|||.|.||.|||..|..|:.||.........
  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455

  Fly   446 DSDPEE 451
            |.|.:|
  Fly   456 DEDFDE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 220/444 (50%)
PTZ00335 6..439 CDD:185562 222/447 (50%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 220/444 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S25
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D514396at2759
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.870

Return to query results.
Submit another query.