DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7794 and gammaTub23C

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster


Alignment Length:476 Identity:139/476 - (29%)
Similarity:242/476 - (50%) Gaps:43/476 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMD--DSFLTFFEFTSHQPCVQPRLVMI 68
            |||.:.:||.|.||....|:..||||||..:|.|.....|  |....|| :.:......||.|::
  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFF-YQADDDHYIPRAVLL 67

  Fly    69 DTEPTVIDEIRTGSYRNLFHPDTLITGK--DDSGSNFARGYNLMASELLDRSMNAIRRVADRCRN 131
            |.||.||:.|....|..|::|:.:...|  ..:|:|:|.||: ...:|.:...:.|.|.||...:
  Fly    68 DLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASGYS-QGEKLQEEVFDIIDREADGSDS 131

  Fly   132 LRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPS-PSISPVIVEPYNALLAAHFS 195
            |.||::..:|.||:|||:|:.|||||.:.:.||: :..|.|:|: ..||.|:|:|||::|.....
  Fly   132 LEGFILCHSIAGGTGSGMGSFIMERLADRYPKKL-IQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195

  Fly   196 MDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTNL 260
            ...||...::||.||..|..:.|::..|:::.:|.:::.::|..|.:.|:......:...|...|
  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260

  Fly   261 VPYPRIHYPLINYAPLV---PISHSQFVNM---STAQLTGQCFQMSNQMVRCNP---SHGKYMAS 316
            :|.|::|:.:..|.||.   .|...|.||:   :...:..:..|..|.||...|   :|..|::.
  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325

  Fly   317 VLLYRGDIAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYY-----VPGGDLAPTNRAC 376
            :.:.:|::.|.:::.:|:.|:..:..:|:.|.||..::.:|...||.     |.|          
  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSG---------- 380

  Fly   377 VAISNNTNIRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFN---EASENICQLV-------- 430
            :.::|:|:|...:.|.:|::|||.:|.||:..:..|.:.:.:.|   |:.|.:..||        
  Fly   381 LMLANHTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATR 445

  Fly   431 HDYLEVDASAPTSRRDSDPEE 451
            .||::..........||..|:
  Fly   446 EDYMQFSVKRGNGPVDSKSED 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 136/459 (30%)
PTZ00335 6..439 CDD:185562 136/462 (29%)
gammaTub23CNP_476804.1 PLN00222 1..451 CDD:215108 136/459 (30%)
gamma_tubulin 4..440 CDD:276957 134/448 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.