DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7794 and tuba4l

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_956089.1 Gene:tuba4l / 327377 ZFINID:ZDB-GENE-030131-5588 Length:449 Species:Danio rerio


Alignment Length:449 Identity:233/449 - (51%)
Similarity:316/449 - (70%) Gaps:6/449 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRL---TQSPMDDSFLTFFEFTSHQPCVQPRLVM 67
            |.|.|||||||:|:.|:||||:|||||...:|.:   ::|..|.||.|||..|.....| ||.|.
Zfish     3 ECISIHIGQAGIQMGNSCWELYCLEHGFQPDGTIVDSSRSLADSSFGTFFSETGAGKYV-PRAVF 66

  Fly    68 IDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADRCRNL 132
            ||.||||:||||.|.||.|:||:.||:||:|:.:|:|||:..:..|::|..::.:|::||:|..|
Zfish    67 IDLEPTVVDEIRNGHYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDSVLDRMRKMADQCTGL 131

  Fly   133 RGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAHFSMD 197
            :|||:|.:.|||:|||..:.:||||..|:||| :.:||.|||:|.:|..:|||||::|..|.:::
Zfish   132 QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK-SKLEFSVYPAPQVSTAVVEPYNSILTTHTTLE 195

  Fly   198 CADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTNLVP 262
            .:|.||:|||||::|||...|::..|:||||||:|||:|||.|||.||.|...|...|.||||||
Zfish   196 HSDCSFMVDNEAIFDICKRNLDIERPSYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLVP 260

  Fly   263 YPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGDIAPN 327
            |||||:||:.|:|::....:....:|..::|..||:.:||||:|:|..|||||..||||||:.|.
Zfish   261 YPRIHFPLVTYSPIISAEKAYHEQLSVPEITNACFEPANQMVKCDPRRGKYMACCLLYRGDVVPK 325

  Fly   328 EINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIAWCRL 392
            ::|.|:.|||..||.:||||.|||||:|::..||..|||||||...||...:||.|.|..||.||
Zfish   326 DVNAAIANIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRL 390

  Fly   393 VNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPEE 451
            .:|||.:|.:||||:.|||||:|||.|:||.|::..|..||.||.|.: |.....|.||
Zfish   391 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVAADS-TDDCGEDEEE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 226/432 (52%)
PTZ00335 6..439 CDD:185562 228/435 (52%)
tuba4lNP_956089.1 PTZ00335 1..449 CDD:185562 233/449 (52%)
alpha_tubulin 2..434 CDD:276955 226/432 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D514396at2759
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.870

Return to query results.
Submit another query.