DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7794 and Tubb4b

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_954525.2 Gene:Tubb4b / 296554 RGDID:735101 Length:445 Species:Rattus norvegicus


Alignment Length:452 Identity:150/452 - (33%)
Similarity:258/452 - (57%) Gaps:18/452 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRL---TQSPMDDSFLTFFEFTSHQPCVQPRLVM 67
            ||:.:..||.|.||....||:...||||...|..   :...::...:.:.|.|..:  ..||.|:
  Rat     3 EIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK--YVPRAVL 65

  Fly    68 IDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADRCRNL 132
            :|.||..:|.:|:|.:..:|.||..:.|:..:|:|:|:|:....:||:|..::.:|:.|:.|..|
  Rat    66 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCL 130

  Fly   133 RGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAHFSMD 197
            :||.:..::|||:|||:||.::.::.|::..:: :..|.|.|||.:|..:||||||.|:.|..::
  Rat   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTFSVVPSPKVSDTVVEPYNATLSVHQLVE 194

  Fly   198 CADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTNLVP 262
            ..|.::.:|||||||||..||.:..|||.:||.:::..:|..|...||.|......::|..|:||
  Rat   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259

  Fly   263 YPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGDIAPN 327
            :||:|:.:..:|||......|:..::..:||.|.|...|.|..|:|.||:|:....::||.::..
  Rat   260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK 324

  Fly   328 EINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIAWCRL 392
            |::..:.|::...|..||:|.|...|..|..:||   .|..::.|     .|.|:|.|:..:.|:
  Rat   325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSAT-----FIGNSTAIQELFKRI 381

  Fly   393 VNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEV-DASAPTSRRDSDPEEDS 453
            ..:|..:::|:||::.|.|||::|..|.||..|:..||.:|.:. ||   |:..:.:.||::
  Rat   382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA---TAEEEGEFEEEA 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 145/432 (34%)
PTZ00335 6..439 CDD:185562 146/436 (33%)
Tubb4bNP_954525.2 PLN00220 1..427 CDD:215107 145/434 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 426..445 5/18 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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