DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7794 and Tubal3

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001099588.1 Gene:Tubal3 / 291287 RGDID:1305289 Length:382 Species:Rattus norvegicus


Alignment Length:390 Identity:188/390 - (48%)
Similarity:259/390 - (66%) Gaps:18/390 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TFFEFTSHQPCVQPRLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASEL 114
            |||..||....| ||.:.:|.||||||.:|.|.|.:||||:.|:.||:|:.:|:|||        
  Rat    10 TFFHETSTGKHV-PRTLFMDLEPTVIDGVRVGKYHSLFHPEQLVNGKEDAANNYARG-------- 65

  Fly   115 LDRSMNAIRRVADRCRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSIS 179
                    |..|::|..|:|||::|:.|||:|||..:.:||||..::.|| |.:||.|||||.||
  Rat    66 --------RYSAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKK-TKLEFSVYPSPRIS 121

  Fly   180 PVIVEPYNALLAAHFSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQR 244
            ..:||||||:|..|.:::.:|.:|:|||||:|:||...|.|..|:|:::||:||||:||.|||.|
  Rat   122 TAVVEPYNAILTTHSTIEYSDCTFMVDNEAVYNICHRKLGVEHPSYSSINRLIAQVLSSITASLR 186

  Fly   245 FGGGSTVSFQELQTNLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPS 309
            |.|...|...|.|||||||||||:|:...||::....:...::|...:|..||::|||:|:|:|.
  Rat   187 FEGPLNVDLIEFQTNLVPYPRIHFPITTLAPIISAEKAYQEHLSVPDITASCFELSNQLVKCDPR 251

  Fly   310 HGKYMASVLLYRGDIAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNR 374
            .|||||..||||||:.|.::|.|:..:|...|.:||||.|||||:|::..||..|||||||...|
  Rat   252 LGKYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINCQPPTVVPGGDLARVQR 316

  Fly   375 ACVAISNNTNIRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDAS 439
            |...:||.|.|..||.||.:|||.:|.::||::.|:.||:|.|.|.||.|::..|..||.||..|
  Rat   317 AVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFEEAREDLAALEKDYEEVGLS 381

  Fly   440  439
              Rat   382  381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 185/385 (48%)
PTZ00335 6..439 CDD:185562 187/388 (48%)
Tubal3NP_001099588.1 alpha_tubulin 7..378 CDD:276955 185/385 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D514396at2759
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.870

Return to query results.
Submit another query.