DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7794 and Tubb3

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_640347.2 Gene:Tubb3 / 246118 RGDID:628595 Length:450 Species:Rattus norvegicus


Alignment Length:459 Identity:157/459 - (34%)
Similarity:262/459 - (57%) Gaps:26/459 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSFLT-------FFEFTSHQPCVQP 63
            ||:.|..||.|.||....||:...||||..:|..    :.||.|.       :.|.:||:  ..|
  Rat     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNY----VGDSDLQLERISVYYNEASSHK--YVP 61

  Fly    64 RLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADR 128
            |.:::|.||..:|.:|:|::.:||.||..|.|:..:|:|:|:|:....:||:|..::.:|:..:.
  Rat    62 RAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECEN 126

  Fly   129 CRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAH 193
            |..|:||.:..::|||:|||:||.::.::.|::..:: :..|.|.|||.:|..:||||||.|:.|
  Rat   127 CDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRI-MNTFSVVPSPKVSDTVVEPYNATLSIH 190

  Fly   194 FSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQT 258
            ..::..|.::.:|||||||||..||.:..|||.:||.:::..:|..|.|.||.|......::|..
  Rat   191 QLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAV 255

  Fly   259 NLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLYRGD 323
            |:||:||:|:.:..:|||......|:..::..:||.|.|...|.|..|:|.||:|:....::||.
  Rat   256 NMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 320

  Fly   324 IAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIA 388
            ::..|::..:..|:...|..||:|.|...|:.|..:||   .|..::.|     .|.|:|.|:..
  Rat   321 MSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPP---RGLKMSST-----FIGNSTAIQEL 377

  Fly   389 WCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEV-DASAPTS---RRDSDP 449
            :.|:..:|..:::|:||::.|.|||::|..|.||..|:..||.:|.:. ||:|...   ..|.|.
  Rat   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDDE 442

  Fly   450 EEDS 453
            |.::
  Rat   443 ESEA 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 151/436 (35%)
PTZ00335 6..439 CDD:185562 152/440 (35%)
Tubb3NP_640347.2 PLN00220 1..447 CDD:215107 157/459 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..450 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.