DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7794 and tba-6

DIOPT Version :9

Sequence 1:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_492419.2 Gene:tba-6 / 172717 WormBaseID:WBGene00006532 Length:464 Species:Caenorhabditis elegans


Alignment Length:441 Identity:220/441 - (49%)
Similarity:307/441 - (69%) Gaps:12/441 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GKGEIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSF-------LTFFEFTSHQPC 60
            |..|:|.||:|||||||.|||||||||||||..:|...:   ||::       .|||..|:....
 Worm     6 GSREVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVE---DDTYDEETETINTFFAETAGGKH 67

  Fly    61 VQPRLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRV 125
            | ||.:.:|.||||:||:|||:||:||||:.|::||:|:.:.:|||...:..|::|..|:.::|:
 Worm    68 V-PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 131

  Fly   126 ADRCRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALL 190
            |:.|..|:||::|.:.|||:|||..:.:||||..::||| ..:||.:||:|.:|..:|||||::|
 Worm   132 AENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKK-PKLEFAIYPAPQVSTSMVEPYNSIL 195

  Fly   191 AAHFSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQE 255
            ..|.:::.:|.:|:|||||:||||...|::..||||||||::||::||.|||.||.|...|...|
 Worm   196 MTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTE 260

  Fly   256 LQTNLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLLY 320
            .|||||||||||:||:.|||||....:.....:.:.:|..||:...|||:|:|..|||||..|||
 Worm   261 FQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLY 325

  Fly   321 RGDIAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNI 385
            |||:.|.:||:|:..:|..|:.:||:|.|||||:|::..||..||||||....|:...|||.|.|
 Worm   326 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAI 390

  Fly   386 RIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEV 436
            ..||.||.:|||.:|.:||||:.|||||:|||.|:||.|::..|..||.|:
 Worm   391 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 218/437 (50%)
PTZ00335 6..439 CDD:185562 219/438 (50%)
tba-6NP_492419.2 PTZ00335 8..453 CDD:185562 219/439 (50%)
alpha_tubulin 8..441 CDD:276955 218/437 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S25
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D514396at2759
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.730

Return to query results.
Submit another query.