DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rim and PCLO

DIOPT Version :9

Sequence 1:NP_001247163.1 Gene:Rim / 42150 FlyBaseID:FBgn0053547 Length:2798 Species:Drosophila melanogaster
Sequence 2:NP_149015.2 Gene:PCLO / 27445 HGNCID:13406 Length:5142 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RimNP_001247163.1 PHD_SF 8..126 CDD:304600
PDZ_signaling 817..919 CDD:238492
C2A_RIM1alpha 1148..1272 CDD:175997
C2B_RIM1alpha 2633..2775 CDD:175994
PCLONP_149015.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..154
DNA_pol3_gamma3 <32..411 CDD:331207
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..583
Atrophin-1 <308..905 CDD:331285
10 X 10 AA tandem approximate repeats of P-A-K-P-Q-P-Q-Q-P-X 397..555
FYVE1_PCLO 587..648 CDD:277313
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 650..929
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 945..1058
OxoGdeHyase_C 947..>1027 CDD:330401
zf-piccolo 1057..1115 CDD:310374
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1120..1163
Neuromodulin_N <1157..1700 CDD:331332
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1183..1386
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1391..1410
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1423..1868
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2169..2192
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2365..2438
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2504..2536
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3407..3508
FtsK 3460..>3965 CDD:332908
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3558..3626
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3652..3746
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3833..3908
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4278..4301
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4389..4411
PDZ_signaling 4496..4587 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4597..4618
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4645..4690
C2A_RIM1alpha 4694..4826 CDD:175997
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4830..4907
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4930..4986
C2 5005..5134 CDD:326325
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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