Sequence 1: | NP_001247163.1 | Gene: | Rim / 42150 | FlyBaseID: | FBgn0053547 | Length: | 2798 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_898844.1 | Gene: | Rims4 / 241770 | MGIID: | 2674366 | Length: | 269 | Species: | Mus musculus |
Alignment Length: | 282 | Identity: | 106/282 - (37%) |
---|---|---|---|
Similarity: | 158/282 - (56%) | Gaps: | 29/282 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 2520 KKSNSTSQLSATGRKRRMGFGKKGKNSFTVHRSEEV--LPGDITRELRTGGGLGVSLGGAGGAAG 2582
Fly 2583 GSGGAGGGGLSRGSSSEV-DAIEQFFGDG---AGGERFSPSLRNDGALNEFVDGLGPGQLVGRQV 2643
Fly 2644 LGAPSLGDIQLSLCHQKGCLEVEVIRARGLQQKAQSKMLPAPYVKVYLVSGKRCVDKMKTSSARR 2708
Fly 2709 TLDPLYQQQLVFKQSYTGCILQITVWGDYGRIEKKVFMGVAQIMLDDLNLSNIVIGWYKLFGTTS 2773
Fly 2774 LVSCPTNIGLGSRRSSIASLDS 2795 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rim | NP_001247163.1 | PHD_SF | 8..126 | CDD:304600 | |
PDZ_signaling | 817..919 | CDD:238492 | |||
C2A_RIM1alpha | 1148..1272 | CDD:175997 | |||
C2B_RIM1alpha | 2633..2775 | CDD:175994 | 72/141 (51%) | ||
Rims4 | NP_898844.1 | C2 | 100..245 | CDD:417471 | 73/144 (51%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167833668 | |
Domainoid | 1 | 1.000 | 144 | 1.000 | Domainoid score | I4578 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D109268at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000817 | |
OrthoInspector | 1 | 1.000 | - | - | otm42672 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12157 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.950 |