Sequence 1: | NP_001247163.1 | Gene: | Rim / 42150 | FlyBaseID: | FBgn0053547 | Length: | 2798 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003201789.3 | Gene: | LOC100537874 / 100537874 | -ID: | - | Length: | 218 | Species: | Danio rerio |
Alignment Length: | 397 | Identity: | 99/397 - (24%) |
---|---|---|---|
Similarity: | 135/397 - (34%) | Gaps: | 196/397 - (49%) |
- Green bases have known domain annotations that are detailed below.
Fly 829 ILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRPGDEILEWNGRG 893
Fly 894 LHNKSADEVYDIIDESRLDAQVELIVSRPIGSGGGSGGSSANVSPISGASGGSANSVPARRSSAN 958
Fly 959 FPHSGLASSMAGSAVVSSGGRYLQRKAPAVEAIEIHRDKPSVLITSPGSPDI--HTSVSGPGSVS 1021
Fly 1022 GSGLRQRGGVGQTQRLGPSHSTHSHSSSGSGSGSGSSTSSVHAPASAHGPVHASASASGSAPGGL 1086
Fly 1087 HGTTTAGHHHHPHPHHYHPHQHPLPHPHQHQGPPAAHLQGHGVGGGIGMGSGSGTTTQPIPIEGR 1151
Fly 1152 LQLKLGYDQNTLQLIVTLVCATGLSLRQSGAGRNPYAKVFLLPDRSHKSKRRTKTVGTTCEPRWG 1216
Fly 1217 QTFVYSG 1223 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rim | NP_001247163.1 | PHD_SF | 8..126 | CDD:304600 | |
PDZ_signaling | 817..919 | CDD:238492 | 41/89 (46%) | ||
C2A_RIM1alpha | 1148..1272 | CDD:175997 | 28/76 (37%) | ||
C2B_RIM1alpha | 2633..2775 | CDD:175994 | |||
LOC100537874 | XP_003201789.3 | PDZ_signaling | 5..87 | CDD:238492 | 41/89 (46%) |
C2 | 158..>204 | CDD:326325 | 23/45 (51%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D109268at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |