Sequence 1: | NP_001247163.1 | Gene: | Rim / 42150 | FlyBaseID: | FBgn0053547 | Length: | 2798 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031759407.1 | Gene: | rims2 / 100125032 | XenbaseID: | XB-GENE-980175 | Length: | 1762 | Species: | Xenopus tropicalis |
Alignment Length: | 2911 | Identity: | 647/2911 - (22%) |
---|---|---|---|
Similarity: | 939/2911 - (32%) | Gaps: | 1294/2911 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDEMPDLSHLTPHERMQIENVLMRQKQEEEKQNEIMRRKQDE----------------------- 42
Fly 43 ----------VVTLEMQIRQRSEQQKKAGVELD---------ATCHICLKTKFADGVGHICHYCN 88
Fly 89 IRCCARCGGKVTLRSNK----VIWVCILCRKKQELLSKTGQWINKTAAQQDGFIRRIEPDGSSDI 149
Fly 150 SQHPIVDPHDTTDKRPKLERTRSAAEKENLPMQRAGSMLRRQYSQQEQPTNRRLS-ASDSG---- 209
Fly 210 ---MDPVMSPGQQMQHHQQQQRARMQPMNPQQAQQGYGMQQQQQPRSGGAYPDDDPRYYQGELDG 271
Fly 272 LMRQHPHLAHPSQVQPQHTPQSHSQQQQSQHQQQHLMPQQHRPSPQQHSQQQQQQQQHSQQFAAR 336
Fly 337 QQ--QHQQQQHQQQVQQSYHAQIHQQPQ-----QHPHPHSQQQQHHQQM----QHQHGQSVPQMG 390
Fly 391 GYQKPPPLTRNLTISGGHAMDSSAYSQQQQQQQRRALAGSQYASQQQRSFSSSEEEFQHQLLAAQ 455
Fly 456 GAVTVTAGSDYDG---GRLQVRTSLDPWRQQRSL-NERDLLSSGGGGGGGVGGADFRHLSHATQR 516
Fly 517 LYASADQRDRYELQLQHR-ERLEQYPLTRTARLDVQQRN-SLNRSNHERQFSGGGAGVGPGGAGG 579
Fly 580 GGAAGAYRRAPPL--AAAGGGGSSSSSTTSSSYYPQSKPQIVIGPGSGYDRGSGSMASMASAAAA 642
Fly 643 TAADAQGQAARNSQRGGLLGATRGGGGSSSVSSTEAAYWDEPATSSSSSAAQDSRRFTERRIKKT 707
Fly 708 VRFDAHDEEASILASSSLPPVTAILPSTAVDVGAATILSSGKSLDAVGVGGADWSRWEAERQGSQ 772
Fly 773 DSATKDSGIDTSSTFTSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYY-------DGEDIL 830
Fly 831 GLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRPGDEILEWNGRGLH 895
Fly 896 NKSADEVYDIIDESRLDAQVELIVSRPIGSGGGSGGSSANVSPISGASGGSANSVPARRSSANFP 960
Fly 961 HSGLASSMAGSAVVSSGGRYLQRKAPAVEAIEIHRDKPSVLITSPGSP----DIHTSVSGPGSVS 1021
Fly 1022 GSGLRQRGGVGQTQRLGPSHSTHSHSSSGSGSGSGSSTSSVHAPASAHGPVHASASASGSAPGGL 1086
Fly 1087 HGTTTAGHHHHPHPHHYHPHQHPLPHPHQHQGPPAAHLQGHGVGGGIGMGSGSGTTTQPIPIEGR 1151
Fly 1152 LQLKLGYDQNTLQLIVTLVCATGLSLRQSGAGRNPYAKVFLLPDRSHKSKRRTKTVGTTCEPRWG 1216
Fly 1217 QTFVYSGLRRCDLNGRLLEVTLWDY--VRYGANDFIGEVVIDLAHHILDDEAEWYQLQPHQDTSY 1279
Fly 1280 LLRDEGSDVDGLILTPTDHLSPPSTMSRLSDSDTTSDCDIDGMTPGASISSMGSSASPPPLLELD 1344
Fly 1345 LNERRSRRDMSPQGRKRVAGMVARDYRTVSGIGQSYHNQASATGYYRRGGGNGVGS--AIGPGGM 1407
Fly 1408 SLSQRSHSAAPSDGYHSSGVGGAASGGPAYGYRSTSPRRGSLSPPDDRYIDYPVLPVHGSSPNAP 1472
Fly 1473 SVYQGPGGVSSAAASASQQQRFQSRSATATPTGSPKKRQLPQVPQTSRSAMLRDRLGQDFDERLA 1537
Fly 1538 SGGRFGRHRTRQPHHQATYRSTGMGGWERHYTGLSDSDLHSMDARMRPRHSLSPDKDFMGEFGD- 1601
Fly 1602 --------SDMESVVSVTSSAFSTQSERPRTSRGLSFPRNWRNLFGVRNSFLGGAGGEPITGLRL 1658
Fly 1659 HHSEPGRANTIEVDDCDYLPVGGAQQLVLLEQLEQLQQLAALAAADSPPISAGIGIQPPHQVL-- 1721
Fly 1722 -VTDANSGQLVEQFYVEPGTMAEEMMEPLDPHLHPHSVFYSPSPHLPPQPFDIDIDTIYPPRRSN 1785
Fly 1786 GLKPNVQATAAAYPLPLLPSFEQFKRITTPITNFFRSSSPAGVHPHAHDHTSTTPSSLVGYVRDH 1850
Fly 1851 QDKSCSHCQNGSQPVVLSTHHTLHLTAAGLAIGACQDPCCLADAHPHPQHQPMGYGEPPSSDPAM 1915
Fly 1916 CGECVDQHFLGGLTGPQLNLGVVPTYHVHTPTPNAHRRARGQMATPAPPPTQSVLRLSRQLSEDA 1980
Fly 1981 LVAAVPISEAKAQPTSILKKPKLERRRLFHEGQSRSLDYDDLHTK-SWGRRRIRYEDEVMPSSGD 2044
Fly 2045 YPYPHSNPYSSYSPTAAMSRRYGSETNIRQSYMGANVDANHPLSHSHFLVTDDKIVTITYDSDVG 2109
Fly 2110 WTRRGVAPSLFRGAHRQRGLADPRNHMSLDLQRTSQQKLYGPAAPYLKRRRNLPHPPSAQNAHNF 2174
Fly 2175 SPMEPGSGMDGLNAAAAGMVEQGNGMGSGGAHNTTSTHNSNHHNSQASSVSVSQSHNQ--QLQQQ 2237
Fly 2238 QQLQQQSVRQKGKEGTTAISGSMMASEQLTKSSSGSGGATSAAAAGHLVVGGTNANNASSSSFAN 2302
Fly 2303 PQPPPPQQQQQLHGSPNNLNNNNKRAPSSTPQQNTNTINDANNLTLDATQQQSQQQQLQQPPNTC 2367
Fly 2368 TNQNTNPTTTLTTTTTTSSNATNAATTTTANATNATTTATNPTTTTTNNTNEPNATTTTTTTNAN 2432
Fly 2433 ADADADADADAPLDAIDWDAIDAMLDDDFSEYDKDKNGAEEAGGSKSAEGAGAEDKVDGSLSDTA 2497
Fly 2498 NDRKKGGGVDQERSPKGGS-----GMGKKSNSTSQLSATGRKRRMGFGKKGKNSFTVHRSEEVLP 2557
Fly 2558 GDITRELRTGGGLGVSLGGAGGAAGGSGGAGGGGLSRGSSSEVDAIEQFFGDG------AGGERF 2616
Fly 2617 SPSLR--NDGALNEFVDGLGPGQLVGRQVLGAPSLGDIQLSLCHQKGCLEVEVIRARGLQQKAQS 2679
Fly 2680 KMLPAPYVKVYLVSGKRCVDKMKTSSARRTLDPLYQQQLVFKQSYTGCILQITVWGDYGRIEKKV 2744
Fly 2745 FMGVAQIMLDDLNLSNIVIGWYKLFGTTSLVSCPTNIGLGSRRSSIASLDS 2795 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rim | NP_001247163.1 | PHD_SF | 8..126 | CDD:304600 | 65/163 (40%) |
PDZ_signaling | 817..919 | CDD:238492 | 44/108 (41%) | ||
C2A_RIM1alpha | 1148..1272 | CDD:175997 | 63/125 (50%) | ||
C2B_RIM1alpha | 2633..2775 | CDD:175994 | 91/141 (65%) | ||
rims2 | XP_031759407.1 | FYVE_like_SF | <146..194 | CDD:333710 | 29/47 (62%) |
PDZ_signaling | 677..758 | CDD:238492 | 42/96 (44%) | ||
C2A_RIM1alpha | 830..953 | CDD:175997 | 63/122 (52%) | ||
PHA03307 | 956..>1198 | CDD:223039 | 77/440 (18%) | ||
C2B_RIM1alpha | 1593..1738 | CDD:175994 | 93/145 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 148 | 1.000 | Domainoid score | I4418 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 601 | 1.000 | Inparanoid score | I937 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D109268at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000817 | |
OrthoInspector | 1 | 1.000 | - | - | otm47771 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2752 |
SonicParanoid | 1 | 1.000 | - | - | X2115 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.090 |