DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alg1 and wcaC

DIOPT Version :9

Sequence 1:NP_650662.1 Gene:Alg1 / 42146 FlyBaseID:FBgn0038552 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_416561.1 Gene:wcaC / 946579 ECOCYCID:G7102 Length:405 Species:Escherichia coli


Alignment Length:347 Identity:67/347 - (19%)
Similarity:117/347 - (33%) Gaps:85/347 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LYCAVTRTK---------LAIDWHNYTYTVLALGMSKGEQSPLIRLVRRLERYFGSKAHTHFCVT 173
            ||..:|||.         |...|.|....|......|..: |.:.||..|        |.|:.||
E. coli    85 LYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHK-PDVTLVWTL--------HDHWSVT 140

  Fly   174 -RAMQEDLQQNWGIG-----------PVKVLYDRAPAQFHPIDLTHKHELYLKLAKDYPQFQAKD 226
             |....|..:.|..|           |||:  |||    |.: :..|.:|:.::.....||.:..
E. coli   141 GRCAFTDGCEGWKTGCQKCPTLNNYPPVKI--DRA----HQL-VAGKRQLFREMLALGCQFISPS 198

  Fly   227 AEQSDVLEATALTQKLASGVVQYRPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQAEPLVYP 291
            ...:|...:.            |.|.|..::.:......:    .:|..|....|| |.:|.:  
E. coli   199 QHVADAFNSL------------YGPGRCRIINNGIDMATE----AILADLPPVRET-QGKPKI-- 244

  Fly   292 SLLCIITG----KGPQKEHYVAEI----EKLQWQKVSVITPWLE--------IEDYPTVLASADL 340
               .::..    .|...:..|.|:    :|::.......:|:..        ..|...::::.:.
E. coli   245 ---AVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQ 306

  Fly   341 GVCLHWSTSGLDLPMKVVDMFGSGLPVCAYDFKCLDELVKHGENGFVFGDHVQLAEQLRIWFENF 405
            ...|.:|:...:.|:.:.:....|:||.|.......|:::......|..:.|....||       
E. coli   307 MDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQL------- 364

  Fly   406 PKNPSILETRAGFQRKIQEFQE 427
             ..|.|  .:|.|...:.||.:
E. coli   365 -SKPEI--AQAIFGTTLAEFSQ 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg1NP_650662.1 GT1_ALG1_like 6..442 CDD:99986 67/347 (19%)
PLN02275 7..402 CDD:215155 61/320 (19%)
wcaCNP_416561.1 WcaC 1..405 CDD:274919 67/347 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.900

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