DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg1 and SPS3F

DIOPT Version :9

Sequence 1:NP_650662.1 Gene:Alg1 / 42146 FlyBaseID:FBgn0038552 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_171984.2 Gene:SPS3F / 839382 AraportID:AT1G04920 Length:1062 Species:Arabidopsis thaliana


Alignment Length:346 Identity:72/346 - (20%)
Similarity:124/346 - (35%) Gaps:120/346 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 ALGMSKGEQ------------SPLIRLVRRLERYFGSKAHTHFCVTRAMQEDLQQNWGIGPVKVL 192
            :||.:|.||            :...::.||:|....|.......:|...|| :.:.||      |
plant   341 SLGRNKLEQLLKQGRQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQE-IDEQWG------L 398

  Fly   193 YD----------RAPA--------QFHP--------IDLTHKHELYLKLAKDYPQFQAKDAEQSD 231
            ||          ||.|        :|.|        :|.|:     :::.:|.|:   .|.:.:.
plant   399 YDGFDVKLEKVLRARARRGVNCHGRFMPRMAVIPPGMDFTN-----VEVQEDTPE---GDGDLAS 455

  Fly   232 VLEATALTQKLA-----SGVVQY--RPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQAEPLV 289
            ::..|..:...|     |.|:::  .|.:..:|..|.. .|.::...||||.      .:..||.
plant   456 LVGGTEGSSPKAVPTIWSEVMRFFTNPHKPMILALSRP-DPKKNITTLLKAF------GECRPLR 513

  Fly   290 YPSLLCIITGKGPQKEHYVAEIEKLQWQKVSVITPWLEIED---------YPTVLASADLG--VC 343
            ..:.|.:|.|...       :|::|.....||:|..|::.|         ||.....:|:.  ..
plant   514 ELANLTLIMGNRD-------DIDELSSGNASVLTTVLKLIDKYDLYGSVAYPKHHKQSDVPDIYR 571

  Fly   344 LHWSTSGLDLPMKVVDMFG--------SGLPVCAYDFKCLDELVKHG---------ENGFVFGDH 391
            |..:|.|:.:...:|:.||        .|||:.|         .|:|         .||.:...|
plant   572 LAANTKGVFINPALVEPFGLTLIEAAAHGLPMVA---------TKNGGPVDIHRALHNGLLVDPH 627

  Fly   392 ---------VQLAEQLRIWFE 403
                     ::|..:..:|.|
plant   628 DQEAIANALLKLVSEKNLWHE 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg1NP_650662.1 GT1_ALG1_like 6..442 CDD:99986 72/346 (21%)
PLN02275 7..402 CDD:215155 70/343 (20%)
SPS3FNP_171984.2 sucrsPsyn_pln 1..1058 CDD:274147 72/346 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.