DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg1 and GlyS

DIOPT Version :9

Sequence 1:NP_650662.1 Gene:Alg1 / 42146 FlyBaseID:FBgn0038552 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_731967.2 Gene:GlyS / 41823 FlyBaseID:FBgn0266064 Length:709 Species:Drosophila melanogaster


Alignment Length:132 Identity:27/132 - (20%)
Similarity:42/132 - (31%) Gaps:62/132 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 LISIGRPSFLLVQN--PPGIPTLIVCYLYCAVTRTKLAIDWHNYTYTVLALGMSKGEQSPLIRLV 155
            |:.|.|..|.:.::  ||             ||...:|.||::                |::..:
  Fly   456 LVKIKRCMFAMQRDSMPP-------------VTTHNVADDWND----------------PVLSSI 491

  Fly   156 RRLERYFGSKAHTHFCVTRAMQEDLQQNWGIGPVKVLYDRAPAQFHPIDLTHKHELYLKLAKDYP 220
            ||. ..|.|:                           :||....|||..||..:.|:   ..||.
  Fly   492 RRC-HLFNSR---------------------------HDRVKMVFHPEFLTSTNPLF---GIDYE 525

  Fly   221 QF 222
            :|
  Fly   526 EF 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg1NP_650662.1 GT1_ALG1_like 6..442 CDD:99986 27/132 (20%)
PLN02275 7..402 CDD:215155 27/132 (20%)
GlySNP_731967.2 Glycogen_syn 53..697 CDD:399009 27/132 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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