DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg1 and alg11

DIOPT Version :9

Sequence 1:NP_650662.1 Gene:Alg1 / 42146 FlyBaseID:FBgn0038552 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001154823.1 Gene:alg11 / 407614 ZFINID:ZDB-GENE-030131-7282 Length:500 Species:Danio rerio


Alignment Length:479 Identity:87/479 - (18%)
Similarity:170/479 - (35%) Gaps:113/479 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GRSPRMQYHAQSLLEENYH-VDMIGYLETRPL--EELTQHPRCRIHELTAVPVTNLTPKLRLLFK 81
            |...|:.:.|...|:..|. |..:.|...:.:  ||:....|.|.:.....||..:..|.|||.:
Zfish    74 GGGERVLWCALRALQNRYQDVSFVVYTGDQGVTAEEILDGARRRFNIRLPRPVKFVFLKHRLLVE 138

  Fly    82 A-FWQTLSLL---MALISIGRPSFLLVQNPPGIPTLIVCYLYCAVTRTKLAIDWHNYTYTVLALG 142
            | .:...:||   :..|.:|..:.          |..|..||         ||...:.:|:....
Zfish   139 AKLYPHFTLLGQSVGSIFLGWEAL----------TEFVPDLY---------IDSMGFAFTLPVFR 184

  Fly   143 MSKGEQ-----------SPLIRLVRRLERYFGSKAH------------THFCVTRAMQ------E 178
            ...|.|           :.::.:||.....|.:..:            .::||...:.      .
Zfish   185 YLGGCQVGSYVHYPTISTDMLSVVRERNPRFNNADYISSNPVLSAIKVIYYCVFALLYGLAGSCS 249

  Fly   179 D---LQQNWGIGPVKVLY---DRAPAQFHPIDLTHKHELYLKLAKDYPQFQAKDAEQSDVLEATA 237
            |   :...|.:|.:..|:   :|....:.|.|:    :.:|    |.|  ..:|.|:.:      
Zfish   250 DVIMVNSTWTLGHILALWRTPNRTSVVYPPCDV----QAFL----DVP--IGEDNEEKE------ 298

  Fly   238 LTQKLASGVVQYRPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQAEPLVYPSLLCIITG--K 300
              ||....           |||...:.|::|..:.::|.:...:..:.||....::..::.|  :
Zfish   299 --QKKCHS-----------LVSVGQFRPEKDHQLQIRAFKKLLDRKEVEPAGREAVKLVLIGGCR 350

  Fly   301 GPQKEHYVAEIEKLQWQKVSVI--------TPWLEIEDYPTVLASADLGVCLHWSTSGLDLPMKV 357
            ..:.|..|..:..| .|::.:.        .|:.|::   ..|..|.:|:...|:.   ...:.:
Zfish   351 NQEDEDRVLMLRGL-CQELGIADRVEFKLNIPFQELK---KDLTDATIGLHTMWNE---HFGIGI 408

  Fly   358 VDMFGSGLPVCAYDF--KCLDELVKH--GENGFVFGDHVQLAEQLRIWFENFPKNPSILETRAGF 418
            |:...:|..:.|:..  ..||.:|.:  |..||:..|....|:.:.......|  .:.||.|...
Zfish   409 VECMAAGTIILAHKSGGPKLDIVVPYDGGPTGFLADDEDNYADAMERILSMSP--ATRLEMRRRA 471

  Fly   419 QRKIQEFQELRWRESWRLIAAPVL 442
            :..:..|.:..:..|:.....|::
Zfish   472 RLSVSRFSDQEFEGSFLSAMEPLM 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg1NP_650662.1 GT1_ALG1_like 6..442 CDD:99986 87/477 (18%)
PLN02275 7..402 CDD:215155 80/437 (18%)
alg11NP_001154823.1 PLN02949 26..496 CDD:215511 87/479 (18%)
GT1_ALG11_like 63..486 CDD:99978 85/468 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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