DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Odj and znf438

DIOPT Version :9

Sequence 1:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001070629.1 Gene:znf438 / 798757 ZFINID:ZDB-GENE-060929-868 Length:746 Species:Danio rerio


Alignment Length:436 Identity:83/436 - (19%)
Similarity:141/436 - (32%) Gaps:186/436 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 SSKAGVA-SKGSPEVSPVLSDPLLKREVLDDTVDTEDDKELLDDDKDLMDDDKDFLEDEKPILRY 143
            |.|..|: :|.||: :|..:    |.:.:::.|.||.           :..|.:..:.:||..:.
Zfish   274 SDKQTVSWAKSSPK-NPTEN----KVKFINNKVKTES-----------LSQDLNNTQFKKPSGKK 322

  Fly   144 PPAKKIRIED-QNFPNRQSPRVRVKRLRVPVVEKADSPPPPPREHV---------RKPRKRRPKP 198
            |..|:..:.| ..|..|:...:...|.|||     :.|||..:...         :|.|..||||
Zfish   323 PGRKRKTMGDILAFEARKKRSLSFFRRRVP-----EKPPPGVQNSASQQKFLDISKKYRSIRPKP 382

  Fly   199 -------------------------------------------------------KVDRSI---- 204
                                                                   ||:..:    
Zfish   383 VLVMEATIPQLVPLPSMSASDNPDQDLLAGQQISGKTLSAPQSSQATDRQPVLNCKVNSGVIYTS 447

  Fly   205 -----KRYVCDQCGWSFNDH--SNMKDH-KLRHFEEKFSCDECGRKFYTMPLLRLHIRVHHKGEK 261
                 :...|::| :.|..|  |:|..| .||    .:.|..|.:.:.....|..|:::||...|
Zfish   448 SRLLHRCPTCNRC-FQFKHHLQSHMNSHSNLR----PYVCPVCRKAYAHSGSLSTHMKLHHAESK 507

  Fly   262 P---YVCKFC-------GMGFAN-----------SPSRCRHERQMHANE-----------LVHPC 294
            |   ..|:||       |:.|::           .||..:||..:...|           .|.|.
Zfish   508 PRKSLCCEFCEKSFGYVGVYFSHLREVHRVILTVEPSISQHEESISVEESSEIDEQASEQRVDPV 572

  Fly   295 KI---CGK------RFNSEKGRLKHEEGHK-------------------------------SDQP 319
            ::   ||:      .|...|..|.:..|.:                               :::.
Zfish   573 ELQIKCGRCQAITPTFADMKLHLLYVHGEEVQVRLRDGAMHGGREAEDELVKHAAHYWRQLNEKR 637

  Fly   320 DVHICLTCNKE-FKEAQFLHRHYSTKYHRKRVNLLVNGPKEEFQSE 364
            ::..|.|||:| |..::|.|..:|.  |::       .|:||.:.|
Zfish   638 NLVHCGTCNEEFFSFSKFKHHLHSN--HQE-------SPEEEEEEE 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdjNP_650661.1 zf-AD 5..77 CDD:214871
COG5048 <202..343 CDD:227381 43/225 (19%)
C2H2 Zn finger 209..229 CDD:275368 8/22 (36%)
C2H2 Zn finger 236..256 CDD:275368 4/19 (21%)
zf-H2C2_2 249..274 CDD:290200 11/34 (32%)
C2H2 Zn finger 265..283 CDD:275368 8/35 (23%)
C2H2 Zn finger 298..314 CDD:275368 4/21 (19%)
zf-C2H2_jaz 322..347 CDD:288983 9/25 (36%)
C2H2 Zn finger 324..343 CDD:275368 8/19 (42%)
znf438NP_001070629.1 zf-C2H2 452..474 CDD:278523 6/22 (27%)
C2H2 Zn finger 454..474 CDD:275368 6/20 (30%)
zf-H2C2_2 466..491 CDD:290200 8/28 (29%)
C2H2 Zn finger 482..502 CDD:275368 4/19 (21%)
C2H2 Zn finger 514..532 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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