DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odj and znf740a

DIOPT Version :9

Sequence 1:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_005172837.1 Gene:znf740a / 571608 ZFINID:ZDB-GENE-030131-5064 Length:543 Species:Danio rerio


Alignment Length:325 Identity:76/325 - (23%)
Similarity:115/325 - (35%) Gaps:98/325 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 PLLKREVLDDTVDTEDDKELLDDDKDLMDDDKDFLEDEKPILRYPPAKKIRIEDQNFPNRQSPRV 164
            |||.|:..|.|.     ..|||:.:  |...:|....:|......|:|   :.:|:.|..::   
Zfish    78 PLLLRKEADFTA-----PRLLDEKE--MRPSEDMQLKKKTRKSGTPSK---VREQDGPAGKA--- 129

  Fly   165 RVKRLRVPVVEKADSPPPPPREHVRKPRKRRPKPKVDRSIKRYVCDQCGWSFNDHSNMKDHKLRH 229
                    ||::..:.|                  :.:..|.::||.|..:|....::|.|.|.|
Zfish   130 --------VVDENGNCP------------------LSKVQKNFICDHCYGAFRSGYHLKRHILIH 168

  Fly   230 FEEK-FSCDECGRKFYTMPLLRLHIRVH---HKGEKPYVCKFCGMGFAN--------------SP 276
            ..|| |:|..|..:|    :.|.|:..|   |.|.|||.|..|.|.|..              .|
Zfish   169 TGEKPFACAVCDMRF----IQRYHLERHSLTHTGVKPYACSMCDMRFFQRYHLERHSLTHTGVKP 229

  Fly   277 SRC---------RHERQMHANELVH------PCKICGKRFNSEKGRLKHEEGHKSDQPDVHICLT 326
            ..|         |:..|.|:  |:|      .|.:|.:||.......:|...|...:|  :.|..
Zfish   230 YACTMCDMRFFQRYHLQRHS--LIHTGVKPYACSMCDRRFFQRYHLQRHSLTHTGVKP--YACSI 290

  Fly   327 CNKEFKEAQFLHRHYST------------------KYHRKRVNLLVNGPKEEFQSEVDPAEFPGY 373
            |:..|.:...|.||..|                  :||.:|.::...|.|....|..|...|..|
Zfish   291 CDMRFFQRYHLQRHSLTHTGVKPFACTMCDMRFFQRYHLQRHSITHTGVKPYACSMCDMRFFHRY 355

  Fly   374  373
            Zfish   356  355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdjNP_650661.1 zf-AD 5..77 CDD:214871
COG5048 <202..343 CDD:227381 47/173 (27%)
C2H2 Zn finger 209..229 CDD:275368 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
zf-H2C2_2 249..274 CDD:290200 12/27 (44%)
C2H2 Zn finger 265..283 CDD:275368 7/40 (18%)
C2H2 Zn finger 298..314 CDD:275368 3/15 (20%)
zf-C2H2_jaz 322..347 CDD:288983 8/42 (19%)
C2H2 Zn finger 324..343 CDD:275368 6/18 (33%)
znf740aXP_005172837.1 COG5048 138..503 CDD:227381 58/244 (24%)
C2H2 Zn finger 148..168 CDD:275368 7/19 (37%)
C2H2 Zn finger 176..196 CDD:275368 6/23 (26%)
C2H2 Zn finger 204..224 CDD:275368 4/19 (21%)
C2H2 Zn finger 232..252 CDD:275368 5/21 (24%)
C2H2 Zn finger 260..280 CDD:275368 5/19 (26%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
C2H2 Zn finger 316..336 CDD:275368 3/19 (16%)
C2H2 Zn finger 344..364 CDD:275368 4/12 (33%)
C2H2 Zn finger 372..392 CDD:275368
C2H2 Zn finger 400..420 CDD:275368
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
C2H2 Zn finger 484..503 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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