DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odj and CG4360

DIOPT Version :10

Sequence 1:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster


Alignment Length:235 Identity:51/235 - (21%)
Similarity:78/235 - (33%) Gaps:84/235 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 SPPPPPREHVRK-----------PRKRRPKPKVDRSIKRYVCDQCGWSFNDHSNMKDHKLRHFEE 232
            :|..|.::.|:.           |||::.            |..|...|...:.:::|...|.:|
  Fly   115 TPISPMKQEVQSVISEEEVVVDDPRKKKQ------------CHVCKNKFRQLTTLRNHMKIHTDE 167

  Fly   233 K-FSCDECGRKFYTMPLLRLHIRVHHKGEKPYVCKFCGMGFANSPSRCRH--------------- 281
            : :.|..|.:.|..:..|..|::: |.||||:.|..|...|....:...|               
  Fly   168 RPYKCKHCDKAFRQISTLTNHVKI-HTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSL 231

  Fly   282 -------------ERQMH-------------------------ANELVHP--CKICGKRFNSEKG 306
                         :.|||                         |.|||.|  |.:|.:||.....
  Fly   232 LNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLST 296

  Fly   307 RLKHEEGHKSDQPDVHICLTCNKEFKEAQFLHRHYSTKYH 346
            ...||..|...:|  :.|.||:|.|.:...|..|  .|.|
  Fly   297 LHNHERTHIDPKP--YKCETCDKSFSQLATLANH--KKIH 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdjNP_650661.1 zf-AD 5..78 CDD:462262
C2H2 Zn finger 209..229 CDD:275368 4/19 (21%)
SUF4-like 212..>257 CDD:411020 10/45 (22%)
C2H2 Zn finger 212..229 CDD:411020 3/16 (19%)
C2H2 Zn finger 236..256 CDD:411020 5/19 (26%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
zf-H2C2_2 249..274 CDD:463886 10/24 (42%)
C2H2 Zn finger 265..283 CDD:275368 4/45 (9%)
C2H2 Zn finger 298..314 CDD:275368 4/15 (27%)
zf-C2H2_jaz 322..347 CDD:432381 9/25 (36%)
C2H2 Zn finger 324..343 CDD:275368 7/18 (39%)
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 4/19 (21%)
zf-H2C2_2 157..181 CDD:463886 6/23 (26%)
C2H2 Zn finger 172..192 CDD:275368 5/20 (25%)
C2H2 Zn finger 200..220 CDD:275368 4/19 (21%)
zf-C2H2_8 281..366 CDD:464935 18/56 (32%)
C2H2 Zn finger 284..304 CDD:275368 6/19 (32%)
C2H2 Zn finger 312..332 CDD:275368 8/21 (38%)
zf-H2C2_2 325..349 CDD:463886 4/10 (40%)
C2H2 Zn finger 340..360 CDD:275368
C2H2 Zn finger 478..498 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
zf-H2C2_2 519..543 CDD:463886
C2H2 Zn finger 534..554 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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