DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odj and su(Hw)

DIOPT Version :10

Sequence 1:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:267 Identity:70/267 - (26%)
Similarity:109/267 - (40%) Gaps:46/267 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 REHVRKPRKRRPKPKVDRSIKRYVCDQCGWSFNDHSNMKDHKLRHFEEK-FSCDECGRKFYTMPL 248
            ::|:.....::|:         |:|..|...|...|.:..|...|..|| |.||.|.:||..:..
  Fly   400 KQHLGTQVVKKPE---------YMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVA 455

  Fly   249 LRLHIRVHHKGEKPYVCKFCGMGFANSPSRCRHERQMHANELVHPCKICGKRFNSEKGRLKHEEG 313
            |:.| |.:|.|||||.|..|...||......||.:: |..|..|.|..|||.|........|.:.
  Fly   456 LKKH-RRYHTGEKPYSCTVCNQAFAVKEVLNRHMKR-HTGERPHKCDECGKSFIQATQLRTHSKT 518

  Fly   314 HKSDQPDVHICLTCNKEFKEAQFLHRHYSTKYHRKRVNLLVNGPKEEFQSEVDPAEFPGYMEEGQ 378
            |....|    |..|:::||..:.|.||..|....||........|..|::   ||....:|:||:
  Fly   519 HIRPFP----CEQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKRNFRT---PALLKEHMDEGK 576

  Fly   379 AEMEDNQAELD---VMLDNID----EEQYEDHEVLQ---------DEDANF-----------EDF 416
            ...:..::.:.   .:::..|    ::.::..:.|:         |.|..|           :|.
  Fly   577 HSPKQQRSSMRSAVKIMERTDCAICDKNFDSSDTLRRHIRTVHECDPDDIFGVEPHPSKRAKKDI 641

  Fly   417 EYEEAIP 423
            |.||.:|
  Fly   642 ESEEVVP 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdjNP_650661.1 zf-AD 5..78 CDD:462262
C2H2 Zn finger 209..229 CDD:275368 5/19 (26%)
SUF4-like 212..>257 CDD:411020 16/45 (36%)
C2H2 Zn finger 212..229 CDD:411020 4/16 (25%)
C2H2 Zn finger 236..256 CDD:411020 8/19 (42%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 249..274 CDD:463886 12/24 (50%)
C2H2 Zn finger 265..283 CDD:275368 6/17 (35%)
C2H2 Zn finger 298..314 CDD:275368 4/15 (27%)
zf-C2H2_jaz 322..347 CDD:432381 8/24 (33%)
C2H2 Zn finger 324..343 CDD:275368 7/18 (39%)
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368
COG5048 <312..517 CDD:227381 41/127 (32%)
C2H2 Zn finger 321..341 CDD:275368
C2H2 Zn finger 350..368 CDD:275368
C2H2 Zn finger 382..402 CDD:275368 0/1 (0%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
C2H2 Zn finger 443..463 CDD:275368 8/20 (40%)
COG5048 <467..620 CDD:227381 39/160 (24%)
C2H2 Zn finger 471..491 CDD:275368 6/20 (30%)
C2H2 Zn finger 499..519 CDD:275368 6/19 (32%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368 4/19 (21%)
C2H2 Zn finger 598..615 CDD:275371 1/16 (6%)
Blue background indicates that the domain is not in the aligned region.

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