DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odj and CG4820

DIOPT Version :9

Sequence 1:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster


Alignment Length:384 Identity:100/384 - (26%)
Similarity:160/384 - (41%) Gaps:78/384 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTECRICGERIFTPHPKNIFEKRNHRIRMAIEQITGLEIVLENMLPQHICACCLLDLTQAVAFR 65
            |...||.||:.:.......||.....::...:..||...:.....||.|||..|.:.|:|...||
  Fly     1 MKEFCRTCGKTVVADECLQIFTPAGRKLLQCVRSITNCWLQNVQDLPNHICTDCQVLLSQVQKFR 65

  Fly    66 QRCLETH---ANLHQRISSKAGVASKGSPEVSPVLS-DPLLKREVLDDTVDTEDDK----EL-LD 121
            :||.:..   |...:|::.....|:.....|....: |||    .:|:.:...|.|    :| ::
  Fly    66 RRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQAAAPDPL----GIDELMSASDIKIEPIQLQME 126

  Fly   122 DD---------------------KDLMDDDKDFLEDEKPI--LRYPPAKKIRIEDQNFPNRQSPR 163
            :|                     :|::...:|:.|.:..:  ....||::        .::.:.:
  Fly   127 EDPQAPYPENQLEQALSYGNAPGEDILPLPEDYGEAQTEVATTTNEPAQR--------RSKNTAK 183

  Fly   164 VRVKRLRVPVVEKADSPPPPPREHVRKPRKRRPKPKVDR---SIKRYVCDQCGWSFNDHSNMKDH 225
            ::.|:..:.|..|.        .||:....::||..|||   |.|..:|:.||..|.|.||:..|
  Fly   184 IKSKKHTMRVGRKL--------IHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVH 240

  Fly   226 KLRHFEEK-FSCDECGRKFYTMPLLRLHIRVHHKGEKPYVCKFCGMGFANSPSRCRHERQMHANE 289
            .|||...| |.||:|.:|.||:.|||.|...|.:|  ||.|.|||:.::.:.||.||||:     
  Fly   241 LLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHTEG--PYACTFCGLEYSTNSSRVRHERE----- 298

  Fly   290 LVHPCKICGKRFNSEKGRLKHEEGH--KSDQPDVHICLTCNKEFKEAQFLHRHYSTKYH 346
               .||         |||....:..  |..:...| |..|:..|..|....:|.::..|
  Fly   299 ---ACK---------KGRAPQSKWEIIKKGERTFH-CEVCDLWFLRAGNFTQHINSSSH 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdjNP_650661.1 zf-AD 5..77 CDD:214871 21/74 (28%)
COG5048 <202..343 CDD:227381 52/146 (36%)
C2H2 Zn finger 209..229 CDD:275368 9/19 (47%)
C2H2 Zn finger 236..256 CDD:275368 10/19 (53%)
zf-H2C2_2 249..274 CDD:290200 11/24 (46%)
C2H2 Zn finger 265..283 CDD:275368 8/17 (47%)
C2H2 Zn finger 298..314 CDD:275368 3/15 (20%)
zf-C2H2_jaz 322..347 CDD:288983 7/25 (28%)
C2H2 Zn finger 324..343 CDD:275368 5/18 (28%)
CG4820NP_001097748.1 zf-AD 4..75 CDD:285071 20/70 (29%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
C2H2 Zn finger 252..272 CDD:275368 10/19 (53%)
C2H2 Zn finger 279..297 CDD:275368 8/17 (47%)
C2H2 Zn finger 322..339 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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