back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Odj and topi

DIOPT Version :10

Sequence 1:	NP_650661.1	Gene:	Odj / 42145	FlyBaseID:	FBgn0038551	Length:	430	Species:	Drosophila melanogaster
Sequence 2:	NP_649945.1	Gene:	topi / 41199	FlyBaseID:	FBgn0037751	Length:	814	Species:	Drosophila melanogaster

Alignment Length:	270	Identity:	77/270 - (28%)
Similarity:	117/270 - (43%)	Gaps:	36/270 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   186 EHVRKPRKRRPKPKVDRS---IKRYVCDQCGWSFNDHSNMKDHKLRHFEEK-FSCDE--CGRKFY 244
            :|:.|  |:|.|...:..   |::|:||.||.|:...|::..|...|...| |.|.|  |.|||.
  Fly   489 KHLNK--KKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFT 551

  Fly   245 TMPLLRLHIRVHHKGEKPYVCKFCGMGFANSPSRCRHERQMHANELVHPCKICGKRFNSEKGRLK 309
            ..|.|..|||..|.||:||:|..||..|.......:| |.:|..|..:.|:.|||||........
  Fly   552 IRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQH-RLIHRGERRYECEECGKRFYRADALKN 615

  Fly   310 HEEGHKSDQPDVHICLTCNKEFKEAQFLHRHYSTKYHRKRVNLLVNGPKEEFQSEVDPAEFPGYM 374
            |:..|..::|  :.||.|.|.|::.....:|...::.....|..:....::||.|...|:   ..
  Fly   616 HQRIHTGEKP--YSCLFCTKTFRQRGDRDKHIRARHSHLDANSRLMMQMQKFQLETAAAQ---KA 675

  Fly   375 EEGQAEMEDNQ-----AELDV---------------MLDNIDEEQYEDHEVLQDEDANFEDF--E 417
            :....|.:||.     :..||               |..:|..||.|:...:..::.|...|  .
  Fly   676 QSHNPEQQDNDVAGGASTSDVPSGSGFMSTEPSVAEMQYSITPEQQEEMVCVPIDEVNNSFFMSH 740

  Fly   418 YEEAIPDGEE 427
            |.:|:|..|:
  Fly   741 YMQAVPMEED 750

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.