DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odj and CG8944

DIOPT Version :10

Sequence 1:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:221 Identity:51/221 - (23%)
Similarity:70/221 - (31%) Gaps:81/221 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 RYVCDQCGWSFNDHSNMKDHKLRHFEEKF------------------------------------ 234
            ::.|:.|..||.:.:|..:|..||.||.|                                    
  Fly   534 KFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRKR 598

  Fly   235 ------------------------------------SCDECGRKFYTMPLLRLHIRVHH-KGEKP 262
                                                .||.|.|.|.|...|..|..||. :.|:.
  Fly   599 RHAAKATDDMVDDDDRIGGGGGGGSGGGGTDIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERC 663

  Fly   263 YVCKF--CGMGFANSPSRCRHERQMHANELVHPCKICGKRFNSEKGRLKHEEGHKSDQPDVHICL 325
            |.|.:  |...|....|...|.:|.::|| ...|.||||.|.|.|....|::.|  |:...::|.
  Fly   664 YKCDYPQCNKSFVARNSLFEHLKQHYSNE-EFKCDICGKTFKSTKNLQNHKQIH--DKIKRYVCQ 725

  Fly   326 TCNKEFKEAQFLHRHYSTKYHRKRVN 351
            .|...|.:|..|:.|   |....|.|
  Fly   726 ICGSAFAQAAGLYLH---KRRHNRPN 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdjNP_650661.1 zf-AD 5..78 CDD:462262
C2H2 Zn finger 209..229 CDD:275368 6/19 (32%)
SUF4-like 212..>257 CDD:411020 19/116 (16%)
C2H2 Zn finger 212..229 CDD:411020 5/16 (31%)
C2H2 Zn finger 236..256 CDD:411020 8/19 (42%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 249..274 CDD:463886 9/27 (33%)
C2H2 Zn finger 265..283 CDD:275368 5/19 (26%)
C2H2 Zn finger 298..314 CDD:275368 6/15 (40%)
zf-C2H2_jaz 322..347 CDD:432381 7/24 (29%)
C2H2 Zn finger 324..343 CDD:275368 6/18 (33%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144
MADF 379..472 CDD:214738
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 636..656 CDD:275368 8/19 (42%)
COG5048 <666..734 CDD:227381 22/70 (31%)
C2H2 Zn finger 666..688 CDD:275368 5/21 (24%)
C2H2 Zn finger 696..716 CDD:275368 9/19 (47%)
C2H2 Zn finger 724..744 CDD:275368 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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