DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odj and zscan2

DIOPT Version :10

Sequence 1:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_002943732.2 Gene:zscan2 / 100486661 XenbaseID:XB-GENE-6033591 Length:491 Species:Xenopus tropicalis


Alignment Length:330 Identity:79/330 - (23%)
Similarity:116/330 - (35%) Gaps:89/330 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SKAGVASKGSPEVSPVLSDPLLKREVLDDTVDTEDDKELLDDDKDLMDDDKDFLEDEKPILRYPP 145
            |.:.:..:|.||.|| |..|......|:| :...|..|..:.|.            .||......
 Frog     8 SGSDMQERGDPEESP-LQSPGTDMRCLED-ISLPDLPETTERDV------------PKPCAGEQS 58

  Fly   146 AKKIR--IEDQNFPNRQSPRVRVKRLRVPVVEKADSP-------------PPP------------ 183
            .::.|  ::....|:|.||    :||.:.|....|.|             |.|            
 Frog    59 IRRRRKPVKTHRNPSRSSP----ERLLLDVTISGDVPGSLVKPECMKESAPSPHGTPWSTLSARS 119

  Fly   184 -----------------PREHVRKP----------------------RKRRPKPKVDRSIKRYVC 209
                             |..::..|                      |..:.:.|....:|.::|
 Frog   120 DVPSASSFSTDLYPQRDPFTYIMPPESAANETSEQHLTAGSQTLCTNRSAKSQKKTSTKVKPFLC 184

  Fly   210 DQCGWSFNDHSNMKDHKLRHFEEK-FSCDECGRKFYTMPLLRLHIRVHHKGEKPYVCKFCGMGFA 273
            ..||..|:..|.:..|...|..|: |.|.|||:.|.:..||..|.:: |.||||:.|..||..|:
 Frog   185 TTCGKRFSQKSLLIQHHRNHTGERPFPCIECGKSFTSCSLLIRHHKI-HTGEKPFACSDCGKRFS 248

  Fly   274 NSPSRCRHERQMHANELVHPCKICGKRFNSEKGRLKHEEGHKSDQPDVHICLTCNKEFKEAQFLH 338
            .|....||:| .|..|..:.|..|||.|:.....:.|:..|..::|  :.|..|.|.|.....|.
 Frog   249 ESSQLVRHQR-THTGERPYTCIECGKSFSESSKLVIHQRTHTGERP--YSCSDCGKSFSVRSHLI 310

  Fly   339 RHYST 343
            .|..|
 Frog   311 THKRT 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OdjNP_650661.1 zf-AD 5..78 CDD:462262
C2H2 Zn finger 209..229 CDD:275368 6/19 (32%)
SUF4-like 212..>257 CDD:411020 16/45 (36%)
C2H2 Zn finger 212..229 CDD:411020 5/16 (31%)
C2H2 Zn finger 236..256 CDD:411020 8/19 (42%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 249..274 CDD:463886 11/24 (46%)
C2H2 Zn finger 265..283 CDD:275368 7/17 (41%)
C2H2 Zn finger 298..314 CDD:275368 4/15 (27%)
zf-C2H2_jaz 322..347 CDD:432381 7/22 (32%)
C2H2 Zn finger 324..343 CDD:275368 6/18 (33%)
zscan2XP_002943732.2 COG5048 <68..314 CDD:227381 62/253 (25%)
C2H2 Zn finger 184..204 CDD:275368 6/19 (32%)
COG5048 208..>471 CDD:227381 39/112 (35%)
C2H2 Zn finger 212..232 CDD:275368 8/20 (40%)
C2H2 Zn finger 240..260 CDD:275368 8/20 (40%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 7/20 (35%)
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
C2H2 Zn finger 380..400 CDD:275368
C2H2 Zn finger 408..428 CDD:275368
C2H2 Zn finger 436..456 CDD:275368
C2H2 Zn finger 464..484 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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