DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and BC024063

DIOPT Version :9

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001360962.1 Gene:BC024063 / 666584 MGIID:2670978 Length:749 Species:Mus musculus


Alignment Length:131 Identity:51/131 - (38%)
Similarity:74/131 - (56%) Gaps:2/131 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 CPKCGRVFKTPYNLKTHMVRHTGEKNFPCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATF 296
            |.:||:.|....:|:.|...|||||.|.||.|.|.|.::...|:|:|| |.||:|:|||.|...|
Mouse   444 CKQCGKAFAYSSSLQIHERSHTGEKLFECTHCSKAFASRSYLRIHKRV-HTGEKPYECNHCGEAF 507

  Fly   297 FTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRS 361
            .:..:..:||: .|..:..|.|:||.|.|..::.|..|:.:|:|.||:.|..|...|..|..|:.
Mouse   508 ASRGSLQNHEK-HHTGEKPYGCNQCGKVFARRSNLQIHERIHTGEKPYGCKQCGKAFVLKRDLQI 571

  Fly   362 H 362
            |
Mouse   572 H 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..74 CDD:285071
zf-C2H2 231..252 CDD:278523 6/19 (32%)
C2H2 Zn finger 232..252 CDD:275368 6/19 (32%)
zf-H2C2_2 244..269 CDD:290200 13/24 (54%)
C2H2 Zn finger 260..281 CDD:275368 9/20 (45%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
BC024063NP_001360962.1 KRAB 4..44 CDD:366587
C2H2 Zn finger 109..128 CDD:275368
COG5048 132..489 CDD:227381 18/44 (41%)
C2H2 Zn finger 136..156 CDD:275368
C2H2 Zn finger 164..184 CDD:275368
C2H2 Zn finger 192..212 CDD:275368
C2H2 Zn finger 220..240 CDD:275368
C2H2 Zn finger 248..268 CDD:275368
C2H2 Zn finger 276..296 CDD:275368
C2H2 Zn finger 304..324 CDD:275368
COG5048 312..736 CDD:227381 51/131 (39%)
C2H2 Zn finger 332..352 CDD:275368
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 388..408 CDD:275368
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 444..464 CDD:275368 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 9/20 (45%)
C2H2 Zn finger 500..520 CDD:275368 6/20 (30%)
C2H2 Zn finger 528..548 CDD:275368 7/19 (37%)
C2H2 Zn finger 556..576 CDD:275368 6/17 (35%)
C2H2 Zn finger 584..604 CDD:275368
C2H2 Zn finger 612..632 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
C2H2 Zn finger 668..688 CDD:275368
C2H2 Zn finger 696..716 CDD:275368
C2H2 Zn finger 724..744 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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