DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and CG6813

DIOPT Version :9

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:350 Identity:87/350 - (24%)
Similarity:142/350 - (40%) Gaps:88/350 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VLAKIKDLTGIWLEQNERQPRHICPSCLNDLNTSIKLKKRIQRVHNEATLRRESGLDEDLESTVS 94
            ::.:|..:||:.|...:.....:|.:||::|..:||.::|       ..:..:..|:        
  Fly    26 LVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQR-------CIIAEKQNLE-------- 75

  Fly    95 DIEPEGDSSDLESEESYDSENYPFDKKAEESDIDLNLAHEDRRNEPHNPYDSETPLIFKHKNPLI 159
              ..|.||.|..::                                        |:|:       
  Fly    76 --RIECDSKDCSTD----------------------------------------PIIY------- 91

  Fly   160 ETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTYPSIKVVKPLALAPEDVAAENVPPAKRTA 224
                   |::.:.            ||.::|......|.:|.: |:..|.:..|..::...|...
  Fly    92 -------EDIDDN------------QIESELDESILCPEVKDL-PMPSAEKVSAPTSLNHQKSIG 136

  Fly   225 RKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTF--CDKRFVTKYLARLHERVRHMGEQPF 287
            ......|||.|||:.....|.:.|.:||||.|||.|.|  |::.|.|:.....|.|: |.||||:
  Fly   137 GGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRI-HTGEQPY 200

  Fly   288 ECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQIN 352
            .|.:|...|.:|.|:..|.| ||..:.||:||.|.|.|.:..||.|||.:|...:...|.:||.:
  Fly   201 VCVYCPRRFSSSGARQEHHR-RHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKH 264

  Fly   353 FARKATLRSHFDSVAHQKRASAILE 377
            |.|.:.|.:|..|..|:::...:.|
  Fly   265 FKRISHLMTHLSSNIHKRKEEKLTE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..74 CDD:285071 11/43 (26%)
zf-C2H2 231..252 CDD:278523 8/20 (40%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:290200 13/26 (50%)
C2H2 Zn finger 260..281 CDD:275368 7/22 (32%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 318..338 CDD:275368 10/19 (53%)
C2H2 Zn finger 346..362 CDD:275368 6/15 (40%)
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 12/66 (18%)
C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
C2H2 Zn finger 172..194 CDD:275368 7/22 (32%)
zf-H2C2_2 186..211 CDD:290200 10/25 (40%)
UFD2 <256..>294 CDD:227443 9/33 (27%)
C2H2 Zn finger 258..280 CDD:275368 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.060

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