DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and si:ch211-276c2.4

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_002664740.1 Gene:si:ch211-276c2.4 / 321704 ZFINID:ZDB-GENE-030131-423 Length:394 Species:Danio rerio


Alignment Length:282 Identity:72/282 - (25%)
Similarity:117/282 - (41%) Gaps:80/282 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 ESGLDEDLESTVSDIEPEGDSSDLESEESYDSENYPFDKKAEESDIDLNLAHEDRRNEPHNPYDS 146
            |..|.|..:|||||.|...:.:|.|..|..|.|    :.:.|:.|.|.:...:|..:|..:.|  
Zfish     7 EIDLSELEQSTVSDEEDIEEQADQELNEDEDDE----EDEDEDEDDDDDDDDDDDEDEDEDEY-- 65

  Fly   147 ETPLIFKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTYPSIKVVKPLALAPED 211
                 :|.|                    |:||                                
Zfish    66 -----YKSK--------------------KTPK-------------------------------- 73

  Fly   212 VAAENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTFCDKRFVTKYLARLH 276
                       |::.:.:  |.:||:.:|...:|:.|::.|||||.|.|..|:|.:.|....::|
Zfish    74 -----------TSKTLHT--CSQCGKNYKHISSLRIHLLSHTGEKPFHCDQCEKTYSTLSGLKIH 125

  Fly   277 ERVRHMGEQPFECNFCSATFFTSTAKSSHERIR-HIRDLRYQCDQCTKRFNTKTCLNKHKFLHSG 340
            : |.|..|:|:.|:.|..:|....:...|::.. .:||  :.|.:|.|.|.|.:.|.:|:.:|||
Zfish   126 Q-VVHFSERPYSCSVCGRSFSRLDSCKQHQKTHDKVRD--HVCTECGKSFTTFSQLKQHQIIHSG 187

  Fly   341 LKPFDCVICQINFARKATLRSH 362
            ||||.|..|..:|.:....:||
Zfish   188 LKPFKCSYCDRSFTQAGNRKSH 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262
zf-C2H2 231..252 CDD:395048 6/20 (30%)
C2H2 Zn finger 232..252 CDD:275368 6/19 (32%)
zf-H2C2_2 244..269 CDD:463886 11/24 (46%)
C2H2 Zn finger 260..281 CDD:275368 6/20 (30%)
C2H2 Zn finger 289..308 CDD:275368 4/18 (22%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..362 CDD:275368 3/15 (20%)
si:ch211-276c2.4XP_002664740.1 C2H2 Zn finger 81..101 CDD:275368 6/19 (32%)
COG5048 <90..369 CDD:227381 42/123 (34%)
C2H2 Zn finger 109..129 CDD:275368 6/20 (30%)
C2H2 Zn finger 137..157 CDD:275368 4/19 (21%)
C2H2 Zn finger 165..185 CDD:275368 7/19 (37%)
C2H2 Zn finger 193..213 CDD:275368 5/17 (29%)
C2H2 Zn finger 221..241 CDD:275368
C2H2 Zn finger 249..269 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 305..325 CDD:275368
C2H2 Zn finger 333..353 CDD:275368
C2H2 Zn finger 361..381 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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