DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and LOC1278771

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_318400.3 Gene:LOC1278771 / 1278771 VectorBaseID:AGAMI1_001625 Length:277 Species:Anopheles gambiae


Alignment Length:275 Identity:64/275 - (23%)
Similarity:102/275 - (37%) Gaps:58/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 EESDIDLNLAHEDRRNEPHNPYDSETPLIFKHKNPLIETPSFANENLPNKVDA------------ 175
            :||.:.:....:...|:.|....|.|.|:.|    :.|.   .|..|...|||            
Mosquito    24 KESLLGVFATEKPLHNDGHTGSSSSTELVEK----IYEC---TNIKLSCTVDAGCAICRRCLQAV 81

  Fly   176 --------KSPKKGNFIQIGTDLRLLTTYPSIKVVKPLALAPEDVAAE-NVPPAKRTARKMQSLV 231
                    :|.|..:.||:.|               .:|...:|.:.. |..||||....: .:.
Mosquito    82 QDFYHFRVRSNKVNDLIQVTT---------------VVANGDDDNSGSGNEAPAKRETTTV-VVP 130

  Fly   232 CPKCGRVFKTPY---------NLKTHMVRHTGEKNFPCTFCDKRFVTKYLARLHERVRHMGEQPF 287
            ||    ...||.         ::.:...:.|||::..|.:|.|.|.|......|.:..|:..:..
Mosquito   131 CP----TTTTPLPAAKQQPKPSIVSSASKTTGERSNRCRYCPKSFRTVAELAEHGKRTHVAGRQH 191

  Fly   288 ECNFCSATFFTSTAKSSHERIRH-IRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQI 351
            .|..|.|.|..:.:.:.|.|.|. ....:|:|..|::.|..:.....|..:|:...|:.|..|..
Mosquito   192 HCPNCLAQFQHAPSLARHMRSRSCFAFSKYRCRVCSESFPERDQWADHIRIHAKDFPYQCPDCWS 256

  Fly   352 NFARKATLRSHFDSV 366
            .|..|||||.|.::|
Mosquito   257 QFKHKATLRRHANTV 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262
zf-C2H2 231..252 CDD:395048 4/29 (14%)
C2H2 Zn finger 232..252 CDD:275368 4/28 (14%)
zf-H2C2_2 244..269 CDD:463886 7/24 (29%)
C2H2 Zn finger 260..281 CDD:275368 6/20 (30%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 318..338 CDD:275368 4/19 (21%)
C2H2 Zn finger 346..362 CDD:275368 8/15 (53%)
LOC1278771XP_318400.3 None
Blue background indicates that the domain is not in the aligned region.

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