DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and si:ch211-241b2.4

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001373223.1 Gene:si:ch211-241b2.4 / 100150909 ZFINID:ZDB-GENE-081104-191 Length:294 Species:Danio rerio


Alignment Length:279 Identity:65/279 - (23%)
Similarity:98/279 - (35%) Gaps:88/279 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LDEDLESTVSDIEPEGDSSDLESEESYDSENYPFDK-KAEESDIDLNLAHEDRRNEPHNPYDSET 148
            :.|..::.::.:|.|.|.|||:|          :.| |.|:.|:...:..||   .||.....:|
Zfish     3 MKETKDNNMNKLEEEDDMSDLDS----------YGKIKEEQQDLLTIIEVED---TPHQFITGDT 54

  Fly   149 PLIFKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTYPSIKVVKPLALAPEDVA 213
                                                  .:...|...:|                
Zfish    55 --------------------------------------SSQTHLRDEFP---------------- 65

  Fly   214 AENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTFCDKRFVTKYLARLHER 278
                              |..||:.|....||..|...|:||:.|.|..|.|.|..:.....|.:
Zfish    66 ------------------CTHCGKSFSCTSNLNRHKKTHSGERPFTCVQCGKSFARRENFYRHNQ 112

  Fly   279 VRHMGEQPFECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKP 343
             .|:||:.|.|..|..:|....|...|.|. |..|..|:|:||.|.|...:.|.:|..:|:.|||
Zfish   113 -SHIGEKSFACMQCGKSFVFVDALKKHMRC-HSGDRPYECEQCGKTFTLMSSLKRHMIIHTDLKP 175

  Fly   344 FDCVICQINFARKATLRSH 362
            :.|..|:.:|:|...|:.|
Zfish   176 YACSQCERSFSRLDCLKKH 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262
zf-C2H2 231..252 CDD:395048 7/20 (35%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:463886 11/24 (46%)
C2H2 Zn finger 260..281 CDD:275368 5/20 (25%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
si:ch211-241b2.4NP_001373223.1 COG5048 <43..272 CDD:227381 53/229 (23%)
C2H2 Zn finger 66..86 CDD:275368 7/19 (37%)
C2H2 Zn finger 94..114 CDD:275368 5/20 (25%)
C2H2 Zn finger 122..142 CDD:275368 6/20 (30%)
C2H2 Zn finger 150..170 CDD:275368 7/19 (37%)
C2H2 Zn finger 178..198 CDD:275368 6/17 (35%)
C2H2 Zn finger 206..226 CDD:275368
C2H2 Zn finger 234..254 CDD:275368
C2H2 Zn finger 262..282 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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