DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17802 and ZSCAN10

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_116194.2 Gene:ZSCAN10 / 84891 HGNCID:12997 Length:780 Species:Homo sapiens


Alignment Length:252 Identity:66/252 - (26%)
Similarity:108/252 - (42%) Gaps:64/252 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 DSDTDADSMSDI------EATSRQSAL---------DEDKKPRRKYTKRSSPKNDDTD---FL-- 264
            :|..:|..::|:      ::..|:|:|         |:|    |:.::.|..:..|:|   |:  
Human   465 ESKAEAPPLTDVLCSHCGQSFQRRSSLKRHLRIHARDKD----RRSSEGSGSRRRDSDRRPFVCS 525

  Fly   265 ---KPAKKKRKTYISQKVHI------CDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFNR 320
               |..::.......::||.      |..||:.||.......|...|:|.||:.||:||::...|
Human   526 DCGKAFRRSEHLVAHRRVHTGERPFSCQACGRSFTQSSQLVSHQRVHTGEKPYACPQCGKRFVRR 590

  Fly   321 YILNIHI---------------------------RVKHRGEKPYACQFCDERFVHSTMRSRHENR 358
            ..|..|:                           :..|.||||..|..|.|.|..|...:||: |
Human   591 ASLARHLLTHGGPRPHHCTQCGKSFGQTQDLARHQRSHTGEKPCRCSECGEGFSQSAHLARHQ-R 654

  Fly   359 VHRNKKTPKNFKCNYCDKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTH 415
            :|..:|.   ..|:.|..|:.::...|:|...|||||.:.|:.|..||.||::|:.|
Human   655 IHTGEKP---HACDTCGHRFRNSSNLARHRRSHTGERPYSCQTCGRSFRRNAHLRRH 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..331 CDD:275368 7/47 (15%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 4/16 (25%)
zf-met 398..421 CDD:289631 8/18 (44%)
C2H2 Zn finger 399..417 CDD:275368 8/17 (47%)
ZSCAN10NP_116194.2 SCAN 40..124 CDD:153421
PHA03418 156..>314 CDD:177646
C2H2 Zn finger 349..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
zf-H2C2_2 391..415 CDD:290200
COG5048 400..774 CDD:227381 66/252 (26%)
C2H2 Zn finger 406..426 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 478..498 CDD:275368 3/19 (16%)
zf-C2H2 522..544 CDD:278523 2/21 (10%)
C2H2 Zn finger 524..544 CDD:275368 1/19 (5%)
zf-H2C2_2 536..561 CDD:290200 6/24 (25%)
C2H2 Zn finger 552..572 CDD:275368 6/19 (32%)
zf-H2C2_2 565..589 CDD:290200 9/23 (39%)
C2H2 Zn finger 580..600 CDD:275368 7/19 (37%)
zf-H2C2_2 592..615 CDD:290200 2/22 (9%)
C2H2 Zn finger 608..628 CDD:275368 0/19 (0%)
zf-H2C2_2 620..645 CDD:290200 9/24 (38%)
C2H2 Zn finger 636..656 CDD:275368 8/20 (40%)
zf-H2C2_2 648..673 CDD:290200 8/28 (29%)
C2H2 Zn finger 664..684 CDD:275368 5/19 (26%)
zf-H2C2_2 676..701 CDD:290200 11/24 (46%)
C2H2 Zn finger 692..712 CDD:275368 8/17 (47%)
C2H2 Zn finger 728..746 CDD:275368
zf-H2C2_2 738..763 CDD:290200
zf-C2H2 752..774 CDD:278523
C2H2 Zn finger 754..774 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.