DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnk and si:ch211-79k12.2

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001313520.1 Gene:si:ch211-79k12.2 / 568844 ZFINID:ZDB-GENE-131121-535 Length:555 Species:Danio rerio


Alignment Length:438 Identity:91/438 - (20%)
Similarity:158/438 - (36%) Gaps:97/438 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DHSKMPRNMCSC--C-LLSLKSAIAFRQACIKTNNRLTIQRRSVEAKDDGCWADPLSDAHE---- 98
            :.|...|..|:|  | |.|..|:.:|:....|.::...||..|      ...:.||..|.|    
Zfish    82 NESHAHRRTCTCPGCPLSSTPSSSSFQTLKPKASSASQIQPPS------STQSTPLQQAKEPSTA 140

  Fly    99 ----------GLKINDAEVEQEVLYEVSYADNEGLEEDHDLYKKEEEESEVNENKEFEDIACEIP 153
                      ||.:::..............:::|......:.:...|...|:..:.|..:.|...
Zfish   141 PVSLGLCLGLGLSLDEENTGSSSTSRPPQQEDKGTSTHSPIPQSNPESPGVSPAQAFPCVCCHRG 205

  Fly   154 FSKEDDEQEQQQEYEDMVDKKTGHDDGEESQ---------------ECEESQPDEEESQQNEEDE 203
            |........||::.|..:.....|.......               .|:.:.|            
Zfish   206 FQTCSQLLSQQKDPESQIAHHYYHHHHHHCPLSSCTSCTHPSFPCLSCQRTFP------------ 258

  Fly   204 EESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKRSSPKNDDTDFLKPAK 268
                 ...:|.::|.|.:..|.                         .::.|..:.:..|.:|::
Zfish   259 -----TCAQLLRHEQGHAQQDG-------------------------LQQLSCMHCNASFPRPSQ 293

  Fly   269 --KKRKTYISQKV--HICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFNRYILNIHIRV 329
              :.::|..:.|.  .:|..||:.|....|..:|:..|:|.:|:.|..||:.......|.||.|:
Zfish   294 LLQHQRTQHATKAGGFLCAECGRAFNSHSNLRIHLNVHTGARPYICTNCGKSFSQSGALKIHRRI 358

  Fly   330 KHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKHEVVHTGE 394
             |.||:||.|.:|...|.|......|: |:|..:|.   :.|..|.|.:..:.....|..:||||
Zfish   359 -HTGERPYTCSYCGRGFPHLAGVRAHQ-RIHTGEKP---YICGQCGKCFTQSGALKIHTRIHTGE 418

  Fly   395 RNFHCEVCKVSFTRNSNLKTHYRS----RQHQNKL----IAMSAKSEI 434
            |.|.|.:|..||:..|.::.|:|:    ....|.:    :|.||.|::
Zfish   419 RPFVCGLCGKSFSNRSGIRFHHRTVHGIVMEPNSVGRPSLAASASSQV 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871 10/35 (29%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..331 CDD:275368 7/20 (35%)
C2H2 Zn finger 339..360 CDD:275368 6/20 (30%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 397..421 CDD:463736 8/27 (30%)
C2H2 Zn finger 399..417 CDD:275368 6/17 (35%)
si:ch211-79k12.2NP_001313520.1 SUF4-like 281..>331 CDD:411020 10/49 (20%)
C2H2 Zn finger 281..302 CDD:411020 3/20 (15%)
C2H2 Zn finger 281..302 CDD:275368 3/20 (15%)
C2H2 Zn finger 311..331 CDD:411020 6/19 (32%)
C2H2 Zn finger 311..331 CDD:275368 6/19 (32%)
zf-C2H2 337..359 CDD:395048 7/22 (32%)
C2H2 Zn finger 339..359 CDD:275368 7/20 (35%)
zf-H2C2_2 351..374 CDD:463886 11/23 (48%)
C2H2 Zn finger 367..387 CDD:275368 6/20 (30%)
zf-C2H2 393..415 CDD:395048 4/21 (19%)
C2H2 Zn finger 395..415 CDD:275368 4/19 (21%)
zf-H2C2_2 407..432 CDD:463886 11/24 (46%)
C2H2 Zn finger 423..442 CDD:275368 6/18 (33%)

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