DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnk and LOC496795

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001011332.2 Gene:LOC496795 / 496795 XenbaseID:XB-GENE-29098971 Length:581 Species:Xenopus tropicalis


Alignment Length:415 Identity:106/415 - (25%)
Similarity:150/415 - (36%) Gaps:102/415 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TDHSKMPRNMCSCCLLSLKSAI------------AFRQACIKTNNRLTIQRRSVEAKDDGCWADP 92
            |.|..:||:..:|....|.|..            ||.....||.:.....||....:   |....
 Frog   119 THHVGLPRSYWTCLDNVLYSQSGDRGLGIAYAPDAFSMPVTKTKHGHKGDRRYTCLE---CGKTF 180

  Fly    93 LSDAHEGLKINDAEVEQEVLYEVSYADNE---GLEEDHDLYKKEEEESEVNENKEFEDIACEIPF 154
            :..:|  ||.:    ::....|..||.||   ...|...|.|.:...|   ..|.:..:.|:..|
 Frog   181 IQSSH--LKSH----QKTHTGEKPYACNECGARFAEKSTLVKHQRTHS---GEKPYVCLICDKAF 236

  Fly   155 SKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPDEEESQQNEEDEEESQEDDDELWQNEDG 219
            |:.......|:.          |...|...||                                |
 Frog   237 SQNSHLTMHQRT----------HIVKETCSEC--------------------------------G 259

  Fly   220 DSDTDADSMSDIEATSRQSALDE---------DKKPRRKYTKRS---SPKNDDTDFLKPAK--KK 270
            ...|:....|.|.:...||...|         |....|..:||.   .....|..|.:.|.  ..
 Frog   260 IIVTNISPYSKIHSAQLQSECSECSQRLVAKLDALSNRIISKREKIYKCTQCDKRFTRSANLVVH 324

  Fly   271 RKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFNRYILNIHIRVKHRGEK 335
            .:|:..:|.:||.:|||.|||:.|...|:..|:|.||:.|.|||:....|..|.:|.|. |.|||
 Frog   325 YRTHTGEKPYICSYCGKTFTDRSNLVSHLRTHTGEKPYSCIECGKSFPYRSALVLHKRT-HTGEK 388

  Fly   336 PYACQ------FCDERFVHSTMRSRHENRVHRNKKT-PKNFKCNYCDKRYESNYQRAKHEVVHTG 393
            |:.|.      ||:.|.|           :|....| .:.|.||.|.|.:..:....||:::|||
 Frog   389 PFVCNECGKSFFCNSRLV-----------LHMKAHTGDRPFGCNVCGKSFSCSSTLIKHQIIHTG 442

  Fly   394 ERNFHCEVCKVSFTRNSNLKTHYRS 418
            ||.:.|..|..:|||.|:|..|.|:
 Frog   443 ERPYVCLECGKAFTRGSHLAIHQRT 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871 11/45 (24%)
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
C2H2 Zn finger 310..331 CDD:275368 8/20 (40%)
C2H2 Zn finger 339..360 CDD:275368 5/26 (19%)
C2H2 Zn finger 371..388 CDD:275370 5/16 (31%)
zf-met 397..421 CDD:463736 9/22 (41%)
C2H2 Zn finger 399..417 CDD:275368 8/17 (47%)
LOC496795NP_001011332.2 KRAB 36..96 CDD:214630
COG5048 173..576 CDD:227381 93/361 (26%)
C2H2 Zn finger 173..193 CDD:275368 4/28 (14%)
C2H2 Zn finger 201..221 CDD:275368 5/19 (26%)
C2H2 Zn finger 229..249 CDD:275368 4/29 (14%)
C2H2 Zn finger 308..328 CDD:275368 3/19 (16%)
C2H2 Zn finger 336..356 CDD:275368 9/19 (47%)
C2H2 Zn finger 364..384 CDD:275368 8/20 (40%)
C2H2 Zn finger 392..412 CDD:275368 6/30 (20%)
C2H2 Zn finger 420..440 CDD:275368 6/19 (32%)
C2H2 Zn finger 448..468 CDD:275368 9/20 (45%)
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 504..524 CDD:275368
C2H2 Zn finger 532..552 CDD:275368
C2H2 Zn finger 560..580 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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