DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17802 and CG4424

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:443 Identity:108/443 - (24%)
Similarity:156/443 - (35%) Gaps:144/443 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTPQCRLC---GDLIYTQNPVNIFDE-------NSKMVRQIALVTGLWLTDHSK---MPRNMCSC 52
            |...||.|   |:    .:.|:||..       ...:..:|..::|:.:...:|   :|..:|..
  Fly     7 MMTLCRTCLQDGE----AHMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICLR 67

  Fly    53 CLLSLKSAIAFRQACIKTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSY 117
            |...|..|..|||.|.::|..|   |..|                    |.|| |||.|:.||  
  Fly    68 CKAFLTLAHKFRQICQRSNEFL---REYV--------------------IKDA-VEQGVVKEV-- 106

  Fly   118 ADNEGLEEDHDLYKKEEEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEE 182
                                                                             
  Fly   107 ----------------------------------------------------------------- 106

  Fly   183 SQECEESQPDEEESQQNEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEAT-------SRQSAL 240
            .|:...|.|...|::|.|..|:|..|:.  :|..||           .||.|       .|.:.|
  Fly   107 VQQTRPSTPPPIETEQLEPPEDEVLEEG--VWSTED-----------PIEETPHGPAEKERPTVL 158

  Fly   241 DEDKKPRRKYTKRSSPKNDDTDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGV 305
            ..:..|.......|:|        .||....   :..|:|:|..||..:..|...:.|:.||:..
  Fly   159 TVEMLPAPYPPPASTP--------PPAPAGA---VKGKLHVCAICGNGYPRKSTLDTHMRRHNDE 212

  Fly   306 KPFECPECGQKEFNRYILNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFK 370
            :|:||..|.:.....|.|..||| :|.|.|||.||:|...|...|...:|| |.|||::.   :.
  Fly   213 RPYECEICHKSFHVNYQLKRHIR-QHTGAKPYTCQYCQRNFADRTSLVKHE-RTHRNERP---YA 272

  Fly   371 CNYCDKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHYRSRQHQN 423
            |..|.|::........|...||||:...|::|..||.|..||..|.:::||.|
  Fly   273 CKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHIN 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071 20/82 (24%)
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
C2H2 Zn finger 310..331 CDD:275368 7/20 (35%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 398..421 CDD:289631 8/22 (36%)
C2H2 Zn finger 399..417 CDD:275368 8/17 (47%)
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 22/88 (25%)
C2H2 Zn finger 189..209 CDD:275368 5/19 (26%)
DUF45 <204..281 CDD:302795 31/81 (38%)
COG5048 210..>345 CDD:227381 44/121 (36%)
C2H2 Zn finger 217..237 CDD:275368 7/20 (35%)
C2H2 Zn finger 245..265 CDD:275368 8/20 (40%)
zf-H2C2_2 257..282 CDD:290200 9/28 (32%)
C2H2 Zn finger 273..293 CDD:275368 4/19 (21%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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