DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnk and CG17803

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:436 Identity:116/436 - (26%)
Similarity:207/436 - (47%) Gaps:74/436 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QCRLCGDLIYT-QNPVNIFDE-NSKMVRQIALVTGLWLTDHSK-MPRNMCSCCLLSLKSAIAFRQ 65
            :||.|..:|.. ::..:::|. |..::..|.::||:|:....| :|.::||.|..::..::.||.
  Fly    85 KCRTCFRIISRHEDAQDLYDRVNIALLHHIKVITGVWIQQGVKELPHHICSTCQETVNKSMEFRA 149

  Fly    66 ACIKTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQE---VLYEVSYADNEGLEEDH 127
            .|.:.:.:|   |::.|..:              ::|.|.|:|.|   ||||.|....:|:....
  Fly   150 KCQQVDKKL---RQTTEKYN--------------IQICDEEMESELENVLYEESAQQAKGVVGLE 197

  Fly   128 DLYKKEEEESE-VNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDG-EESQECEESQ 190
            |...:...:|| |.:..:|...|....||..:||.:        :|:.|..|.. |:::.|    
  Fly   198 DFSSELLPDSEGVLDEDDFPLDAEPTQFSLSEDELD--------LDRDTEKDFALEQNKSC---- 250

  Fly   191 PDEEESQQNEEDEEESQEDDD--ELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKR 253
             :|..|.:..:.:||..:.|.  ::::...|:       .:.::.|:.:.:|...|||:    .|
  Fly   251 -NEIISIRKCKTKEEIGKVDHGAKVYKVVLGE-------YNSLKETAPKYSLSLPKKPQ----LR 303

  Fly   254 SSPKNDDTDFLKPAKKKRKTYISQKV--HICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQK 316
            .||:..:        ::|:..|..|.  ::||.||..|..:....:|:|||:..|.||||||.:|
  Fly   304 VSPEEKN--------RRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPECPKK 360

  Fly   317 EFNRYILNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVH------------RNKKTPKNF 369
            .::.|..|||:|..|:||.|:.|..|:|.|.:::.|.|||..||            :.:.:.:::
  Fly   361 FYDLYTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRHY 425

  Fly   370 KCNYCDKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTH 415
             |..|.|.|.|......|...|.|.|.|.|::|::.|...|.:|.|
  Fly   426 -CTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRH 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871 18/72 (25%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..331 CDD:275368 10/20 (50%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 5/16 (31%)
zf-met 397..421 CDD:463736 7/19 (37%)
C2H2 Zn finger 399..417 CDD:275368 6/17 (35%)
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 19/76 (25%)
SUF4-like 320..>376 CDD:411020 23/55 (42%)
C2H2 Zn finger 323..351 CDD:411020 9/27 (33%)
C2H2 Zn finger 326..346 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..375 CDD:411020 10/20 (50%)
C2H2 Zn finger 354..375 CDD:275368 10/20 (50%)
C2H2 Zn finger 383..401 CDD:275368 7/17 (41%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
C2H2 Zn finger 454..474 CDD:275368 6/17 (35%)
C2H2 Zn finger 481..501 CDD:275368
C2H2 Zn finger 509..528 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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