DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17802 and CG6654

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:604 Identity:121/604 - (20%)
Similarity:202/604 - (33%) Gaps:190/604 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLCGDLIYTQNP-VNIFDENS-----KMVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFR 64
            ::|...:.:..| ::|:|..|     .|:|:.   |......:..:|..:|..||..:.:...|:
  Fly     5 KICLTCLSSTGPLLSIYDGGSGSCLADMIREF---TKTKPRRNDNLPEKVCLSCLSEISNCYTFK 66

  Fly    65 QACIKTNNRL---------------------------TIQRRSVEAKDDGCWADPLSDAHEGLKI 102
            ..|..::..|                           .:|..|.|  .|.|.|...:||   :..
  Fly    67 IKCENSSRTLRQLLPNALPEEPDSKVSISCPVATTDQAVQTTSWE--PDRCTASVQTDA---VTT 126

  Fly   103 NDAE-----VEQEVLYEVSYADNEGLEEDHDLYKKEEEES-----EVNENKEFEDIACEIPFSKE 157
            .|||     ::..:..::.| :.||...|::|..:..|::     :|..|.:.|.   |:.|::.
  Fly   127 TDAEQNTSLIKSTISVDLDY-EGEGEVFDYELPDEPVEKTTSLILQVQGNLKDEK---EVVFTQT 187

  Fly   158 ------DDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPDEEES-----QQNEEDEEE----SQ 207
                  ||.:.:||..|..:....|.|:..|.......|....:|     .|.|.|:.:    |:
  Fly   188 NVIYEGDDHELEQQIRECNLAIFEGVDNEAEIITVTAPQVTTRKSAAKLLTQQENDKHQTPVGSK 252

  Fly   208 EDDDELWQNEDGDS-------------DTDADSMSDIEATSRQSALDEDKK-------------- 245
            |:..||.:.:...|             |..|...||.|.:.:|..|...:|              
  Fly   253 EEARELEKEQVPQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPST 317

  Fly   246 -------PRRKY------------------------TKRSSPKND-DTDFLKP------------ 266
                   |..||                        ..|:...|: :..|:.|            
  Fly   318 TSGAATTPELKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGA 382

  Fly   267 --------------------------------------------AKKKRKTYISQKVHICDHCGK 287
                                                        .:...:.:..:|..:|:.|||
  Fly   383 HNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGK 447

  Fly   288 KFTDKGNFNLHVLRHSGVKPFECPECGQKEFNRYILNIHIRVKHRGEKPYACQFCDERFVHSTMR 352
            .||...|...|.||||..|.|:|..|......:..|..|.|. |.|:||:.|:.|..||..|...
  Fly   448 SFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHART-HTGDKPFECEVCLARFTTSCSL 511

  Fly   353 SRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHYR 417
            ::|: |.|..::.   :.|:.|..|:.:......|...|||||.:.|..|..:||:..:.:.|.|
  Fly   512 AKHK-RKHTGERP---YACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQR 572

  Fly   418 SRQHQNKLIAMSAKSEIDS 436
            :.|.:...|......|..|
  Fly   573 THQGERIYICPVCNEEFKS 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071 14/73 (19%)
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
C2H2 Zn finger 310..331 CDD:275368 5/20 (25%)
C2H2 Zn finger 339..360 CDD:275368 7/20 (35%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 398..421 CDD:289631 6/22 (27%)
C2H2 Zn finger 399..417 CDD:275368 5/17 (29%)
CG6654NP_650429.1 zf-AD 6..79 CDD:285071 15/75 (20%)
C2H2 Zn finger 331..354 CDD:275368 0/22 (0%)
COG5048 <357..570 CDD:227381 48/217 (22%)
C2H2 Zn finger 360..380 CDD:275368 3/19 (16%)
C2H2 Zn finger 385..406 CDD:275370 0/20 (0%)
C2H2 Zn finger 414..434 CDD:275368 0/19 (0%)
zf-H2C2_2 427..451 CDD:290200 6/23 (26%)
C2H2 Zn finger 442..490 CDD:275368 19/48 (40%)
C2H2 Zn finger 470..487 CDD:275368 3/16 (19%)
zf-H2C2_2 482..507 CDD:290200 11/25 (44%)
C2H2 Zn finger 498..518 CDD:275368 7/20 (35%)
zf-H2C2_2 510..534 CDD:290200 6/27 (22%)
C2H2 Zn finger 526..546 CDD:275368 4/19 (21%)
zf-H2C2_2 539..563 CDD:290200 9/23 (39%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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