DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17802 and CG6813

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:423 Identity:105/423 - (24%)
Similarity:161/423 - (38%) Gaps:148/423 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRLCGDLIYTQNPVNIFDE-NSKMVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFRQACI 68
            ||:|.   .:..|:::|.. |..:||||..:||:.|:...::...||:.||.:|::||.|||.||
  Fly     6 CRICS---RSDAPIDLFGPGNGHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCI 67

  Fly    69 KTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSYADNEGLEEDHDLYKKE 133
            ....: .::|...::||  |..||                  ::|| ...||             
  Fly    68 IAEKQ-NLERIECDSKD--CSTDP------------------IIYE-DIDDN------------- 97

  Fly   134 EEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPDEEESQQ 198
            :.|||::|:     |.|              .|.:|:                            
  Fly    98 QIESELDES-----ILC--------------PEVKDL---------------------------- 115

  Fly   199 NEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKRSSPKNDDTDF 263
                                        .|...|..|..::|:..|    .....:.|       
  Fly   116 ----------------------------PMPSAEKVSAPTSLNHQK----SIGGGTGP------- 141

  Fly   264 LKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECP--ECGQKEFNRYILNIH 326
                            ::|..||:...:|.||..|.|||:|:|.|.|.  .|.:....|..|..|
  Fly   142 ----------------YVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSH 190

  Fly   327 IRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKHEVVH 391
            .|: |.||:||.|.:|..||..|..|..|..| |||:   :.::|:.|.|.:.|:....||:::|
  Fly   191 TRI-HTGEQPYVCVYCPRRFSSSGARQEHHRR-HRNE---RRYECDTCKKSFVSSGCLRKHKMIH 250

  Fly   392 TGERNFHCEVCKVSFTRNSNLKTHYRSRQHQNK 424
            ...||.:|.||:..|.|.|:|.||..|..|:.|
  Fly   251 VDARNHYCYVCQKHFKRISHLMTHLSSNIHKRK 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071 25/69 (36%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..331 CDD:275368 6/22 (27%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 5/16 (31%)
zf-met 398..421 CDD:289631 10/22 (45%)
C2H2 Zn finger 399..417 CDD:275368 9/17 (53%)
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 25/73 (34%)
C2H2 Zn finger 144..164 CDD:275368 8/19 (42%)
C2H2 Zn finger 172..194 CDD:275368 6/22 (27%)
zf-H2C2_2 186..211 CDD:290200 12/25 (48%)
UFD2 <256..>294 CDD:227443 12/28 (43%)
C2H2 Zn finger 258..280 CDD:275368 10/21 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.960

Return to query results.
Submit another query.