DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17802 and CG6689

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:510 Identity:132/510 - (25%)
Similarity:205/510 - (40%) Gaps:166/510 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QCRLC-GDLIYTQNPVNIFD-ENSKMVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFRQA 66
            :||.| .|........::|| .||.::..|.:::|:|::.....||.||..|..:|..||.||:.
  Fly   166 KCRTCYNDFTADFRAKDLFDPANSVLLFHIEVISGVWISHKPDEPRLMCPACKSALDQAIDFREM 230

  Fly    67 CIKTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSYADNEG-LEEDHDLY 130
            ||.|..:|:      :||       |.:|          ||:.|       |:||. :..||||.
  Fly   231 CISTELKLS------QAK-------PSTD----------EVQIE-------AENENPISSDHDLI 265

  Fly   131 KKEEEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPDEEE 195
                                      .|.|....:|.||     .|.|..|     :|:..|::.
  Fly   266 --------------------------SDTENTNVEEIED-----AGGDHVE-----DEATSDDQT 294

  Fly   196 SQQNEEDEEESQEDDD------------ELWQNEDGDSDTDADSMSDIEATSRQSALDE---DKK 245
            ||:..::..||....|            ||.....|.........:.|  .|:..|.::   ::|
  Fly   295 SQEAVDEVAESPAAQDPLSVALGAKIFKELLDQYTGKEKARLRKGAPI--ASKPKAKEKAAGEQK 357

  Fly   246 PRRKYTKRSSPK-NDDTDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFE 309
            |:|.    ::|| .::.:.::.|:.:.|    ....:||.||:.|....|..:|:|||:..|.::
  Fly   358 PKRS----ANPKTKEERNLIRRAQLRAK----PPNFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQ 414

  Fly   310 CPECGQKEFNRYILNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVH-----------RNK 363
            |.||.:..::.|:.|:|||::||||.|:||.||.|.|.:...|.:||:.||           ..|
  Fly   415 CTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVKRINPK 479

  Fly   364 KTPK-----NFKCNYCDKRYESN------------------------------------------ 381
            ..||     .::|..|.|.|.|.                                          
  Fly   480 PMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMTHEKRP 544

  Fly   382 ----------YQRAK---HEVVHTGERNFHCEVCKVSFTRNSNLKTHYRSRQHQN 423
                      |||.:   ||::|||||.:.||||.|:|....|:|:|..|:.||:
  Fly   545 LQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMHQD 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071 24/71 (34%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..331 CDD:275368 8/20 (40%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 8/71 (11%)
zf-met 398..421 CDD:289631 10/22 (45%)
C2H2 Zn finger 399..417 CDD:275368 9/17 (53%)
CG6689NP_650051.1 THAP 2..96 CDD:283206
zf-AD 167..240 CDD:214871 25/78 (32%)
zf-C2H2 385..407 CDD:278523 8/21 (38%)
C2H2 Zn finger 387..407 CDD:275368 8/19 (42%)
zf-H2C2_2 399..422 CDD:290200 9/22 (41%)
C2H2 Zn finger 415..436 CDD:275368 8/20 (40%)
C2H2 Zn finger 444..460 CDD:275368 6/15 (40%)
C2H2 Zn finger 492..512 CDD:275368 5/19 (26%)
C2H2 Zn finger 520..540 CDD:275368 0/19 (0%)
C2H2 Zn finger 547..567 CDD:275368 5/19 (26%)
zf-met 574..597 CDD:289631 10/22 (45%)
C2H2 Zn finger 575..591 CDD:275368 8/15 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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