Protein Alignment Nnk and ranshi

DIOPT Version :10

• Sequence 1: NP_650659.2
• Gene: Nnk / 42143
• FlyBaseID: FBgn0038549
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_649824.1
• Gene: ranshi / 41041
• FlyBaseID: FBgn0037620
• Length: 346
• Species: Drosophila melanogaster
• Alignment Length: 428
• Identity: 121/428 - (28%)
• Similarity: 190/428 - (44%)
• Gaps: 104/428 - (24%)

  Fly     5 CRLCGDLIYTQNPVNIFDE-NSKMVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFRQACI 68
            ||.||.....:..:|||:: |...:..|.|:||..|.:.|.:|..:|:.|...|:.||:||:.|
  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRERC- 69

  Fly    69 KTNNRLTIQRRSVEAKDDG-----CWADPLSD-AHEGLKINDAEVEQEVLYEVSYADNEGLEEDH 127
                 |.:||..:.::||.     |...|.|. ..|.|:::.||:..||
  Fly    70 -----LEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEV---------------- 113

  Fly   128 DLYKKEEEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPD 192
                  |...::||.          |.      |....:.||:::               ||:.:
  Fly   114 ------ERLDDLNEG----------PI------QSSGFKVEDILN---------------ESKIN 141

  Fly   193 EEESQQNEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKRSSPK 257
            |:|  .|.||:.:..|.|..::     :|||:.|:..::::.|      |:.|.||   .|.:|:
  Fly   142 EDE--PNNEDDIDYSEMDYLIY-----ESDTEVDAKQELKSDS------ENPKKRR---NRRNPR 190

  Fly   258 NDDTDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFNRYI 322
            :                 |.:...|:.||....|:.:|.||..||.|||.|.|..|..:......
  Fly   191 D-----------------SNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAE 238

  Fly   323 LNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKH 387
            |..||| ||.||||:.|:.|...|...:.|.:|| |.|.|::.   |.|..|:..:.::|....|
  Fly   239 LKRHIR-KHTGEKPFKCRHCSRSFSDYSTRLKHE-RTHTNERP---FVCKECNNAFTTSYILKNH 298

  Fly   388 EVVHTGERNFHCEVCKVSFTRNSNLKTHYRSRQHQNKL 425
            .:|||||:.|.|::|...|:|.::|.|||||..|:..:
  Fly   299 MLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNM 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nnk	NP_650659.2	zf-AD	4..74	CDD:214871	23/69 (33%)
		C2H2 Zn finger	282..302	CDD:275368	7/19 (37%)
		C2H2 Zn finger	310..331	CDD:275368	6/20 (30%)
		C2H2 Zn finger	339..360	CDD:275368	7/20 (35%)
		C2H2 Zn finger	371..388	CDD:275370	3/16 (19%)
		zf-met	397..421	CDD:463736	11/23 (48%)
		C2H2 Zn finger	399..417	CDD:275368	7/17 (41%)
ranshi	NP_649824.1	zf-AD	5..76	CDD:462262	26/75 (35%)
		C2H2 Zn finger	198..218	CDD:275368	7/19 (37%)
		COG5048	222..>276	CDD:227381	22/55 (40%)
		C2H2 Zn finger	226..246	CDD:275368	6/20 (30%)
		zf-H2C2_2	238..262	CDD:463886	12/24 (50%)
		C2H2 Zn finger	254..274	CDD:275368	7/20 (35%)
		C2H2 Zn finger	282..302	CDD:275368	4/19 (21%)
		zf-H2C2_2	295..319	CDD:463886	10/23 (43%)
		C2H2 Zn finger	310..328	CDD:275368	7/17 (41%)