DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnk and ouib

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_649822.2 Gene:ouib / 41039 FlyBaseID:FBgn0037618 Length:312 Species:Drosophila melanogaster


Alignment Length:421 Identity:121/421 - (28%)
Similarity:172/421 - (40%) Gaps:122/421 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRLCGDLIYTQNPVNIFD-ENSKMVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFRQACI 68
            ||:||.....:..:|:|| .|.|.::.:.:::||.|.|...:|..||.||...|:||:|||:.||
  Fly     6 CRVCGRQKICEKSLNLFDLVNRKYLKHLHMISGLRLVDLDDVPGFMCLCCQAELRSALAFRKLCI 70

  Fly    69 KTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSYADNEGLEEDHDLYKKE 133
            ||..:               |          |.|.|              |:...:||       
  Fly    71 KTQTK---------------W----------LTIED--------------DSSSGDED------- 89

  Fly   134 EEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPDEEESQQ 198
                 .|:|.|.|...|               .:.|...||.|....|..|...|.:|       
  Fly    90 -----TNDNSELESEKC---------------AFSDFGKKKEGELVEETFQVLIEEEP------- 127

  Fly   199 NEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKRSSPKNDDTDF 263
                                    .|.....|.:|..|:..:||...|.:|..|.|: |.||   
  Fly   128 ------------------------MDKTLNRDAKAQLREDGIDEKCVPSQKIIKVST-KLDD--- 164

  Fly   264 LKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFNRYILNIHIR 328
                          :::||:.||...|.|..|..|:.:|.|.:||.|.:|..:..:...|..|.|
  Fly   165 --------------QIYICELCGTHATSKPTFQRHMRKHRGERPFGCKDCDARFLSAGELRAHHR 215

  Fly   329 VKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKHEVVHTG 393
            | |.||:|:||:||::|:|....|..|| |.|.|.:.   :.|..|.|::.:.|....|.|:|||
  Fly   216 V-HTGEQPFACRFCEKRYVSYMGRLIHE-RTHTNDRP---YVCEECGKKFTTAYVLKNHMVIHTG 275

  Fly   394 ERNFHCEVCKVSFTRNSNLKTHYRSRQH-QN 423
            ||||.|::|..||.|.::|.||.||..| ||
  Fly   276 ERNFRCDICDRSFQRKAHLVTHTRSMMHLQN 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871 28/69 (41%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..331 CDD:275368 6/20 (30%)
C2H2 Zn finger 339..360 CDD:275368 9/20 (45%)
C2H2 Zn finger 371..388 CDD:275370 4/16 (25%)
zf-met 397..421 CDD:463736 11/23 (48%)
C2H2 Zn finger 399..417 CDD:275368 8/17 (47%)
ouibNP_649822.2 zf-AD 5..78 CDD:214871 29/96 (30%)
C2H2 Zn finger 169..189 CDD:275368 7/19 (37%)
zf-H2C2_2 182..206 CDD:463886 8/23 (35%)
C2H2 Zn finger 197..217 CDD:275368 6/20 (30%)
SFP1 <219..269 CDD:227516 19/53 (36%)
C2H2 Zn finger 225..245 CDD:275368 9/20 (45%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 266..288 CDD:463886 11/21 (52%)
C2H2 Zn finger 281..299 CDD:275368 8/17 (47%)

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