DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17802 and nom

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster


Alignment Length:438 Identity:101/438 - (23%)
Similarity:167/438 - (38%) Gaps:121/438 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRLCGDLIYTQNPVNIFDENSK-MVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFRQACI 68
            ||:||........|.:|....: ::|:|.|:||:.|......|..:|.||...|:||:.||:.||
  Fly     6 CRVCGRSRLCPKAVELFKPGRQDILRRIQLITGILLQQIPNAPDMVCFCCQTDLQSAMIFRRQCI 70

  Fly    69 KTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSYADNEGLEEDHDLYKKE 133
                   :|::.        |...|.                       :|..|        ..|
  Fly    71 -------LQQKK--------WVPLLQ-----------------------SDKVG--------ASE 89

  Fly   134 EEESEVNENKEFEDIACEIPFSKEDDEQEQQ-------QEYEDMVDKKTGHDDGEESQECEESQP 191
            |::.|.|:           |.:|:...:.::       :..:.:|..::....||.....|..||
  Fly    90 EKKVEPND-----------PSTKKKTTKRRRGRPRMPLEIVDIVVTNESKASAGESVGGDEFDQP 143

  Fly   192 DEEESQQNEEDEEESQEDDDELWQNEDG-DSDTDADSMSDIEATSRQSALDEDKKPRRKYTKRSS 255
            .|..::.:..|.:.:.|:.|  ..:||| :||.|..::                           
  Fly   144 VEISNEPDATDSDVNLEEID--LPDEDGLESDHDLPNV--------------------------- 179

  Fly   256 PKNDDTDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFNR 320
                                  ::|.||.||....:|.:...|...|:|::|:.|.||.:.....
  Fly   180 ----------------------QIHKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVA 222

  Fly   321 YILNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRA 385
            ..|..|....|..|.|:||::||.|:.....|.:|| |||.|::.   |.|:.|.|.:.......
  Fly   223 SELKAHNLTHHTLEPPFACRYCDRRYFSVVGRKKHE-RVHTNERP---FVCDQCGKAFTRTCILK 283

  Fly   386 KHEVVHTGERNFHCEVCKVSFTRNSNLKTHYRSRQHQNKLIAMSAKSE 433
            .|..||...|.:.|:||..||:...:|.||:.|..|:....|:::.||
  Fly   284 AHMAVHQVVRKYSCDVCDRSFSLKKHLATHFISNTHKRNAEAVTSSSE 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071 23/69 (33%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..331 CDD:275368 5/20 (25%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 398..421 CDD:289631 9/22 (41%)
C2H2 Zn finger 399..417 CDD:275368 8/17 (47%)
nomNP_001262384.1 zf-AD 5..76 CDD:214871 24/84 (29%)
C2H2 Zn finger 184..204 CDD:275368 6/19 (32%)
C2H2 Zn finger 212..261 CDD:275368 17/49 (35%)
zf-H2C2_2 255..278 CDD:290200 10/26 (38%)
C2H2 Zn finger 269..289 CDD:275368 4/19 (21%)
zf-H2C2_2 282..305 CDD:290200 8/22 (36%)
C2H2 Zn finger 297..313 CDD:275368 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_120097
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.860

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