DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nnk and CG15710

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_611122.1 Gene:CG15710 / 36832 FlyBaseID:FBgn0034120 Length:265 Species:Drosophila melanogaster


Alignment Length:156 Identity:35/156 - (22%)
Similarity:54/156 - (34%) Gaps:51/156 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 CDHCGKKFTDKGNFNLHVLRH---------------SGVKPFECPECGQKEFNRYILNIHIRVKH 331
            |..|..||.....:..|:..|               :..|.|.|..| :.||....         
  Fly   123 CASCHVKFGTDLEYRTHLESHLIPCESTDESYEGAYTITKTFNCVFC-RTEFKACF--------- 177

  Fly   332 RGEKP------YACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKHEVV 390
               ||      |||..|..|     ::::.|.:....|:.|: ..|:.|.|:|:  |:...|..:
  Fly   178 ---KPGQVTRRYACDACIVR-----LKAQEEEKKILGKRRPE-LICDRCGKKYK--YEGFLHRHL 231

  Fly   391 HTGERNFHC---------EVCKVSFT 407
            .|.:....|         ||.:|:||
  Fly   232 KTCQMPDKCKRKREIEITEVSEVTFT 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
C2H2 Zn finger 310..331 CDD:275368 4/20 (20%)
C2H2 Zn finger 339..360 CDD:275368 4/20 (20%)
C2H2 Zn finger 371..388 CDD:275370 5/16 (31%)
zf-met 397..421 CDD:463736 6/20 (30%)
C2H2 Zn finger 399..417 CDD:275368 6/18 (33%)
CG15710NP_611122.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.